RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 TOGARAM2Q6ZUX3 1019 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 RSRC2Q7L4I2 434 aaKnown RBP14.26□□□□□ -0.13
TRIM28-211ENST00000597968 ANKS1BQ7Z6G8 1248 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 PIP4P1Q86T03 277 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 FMR1NBQ8N0W7 255 aaPredicted RBP14.26□□□□□ -0.13
TRIM28-211ENST00000597968 JAKMIP2Q96AA8 810 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 PCED1AQ9H1Q7 454 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 ZDHHC4Q9NPG8 344 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 CNGB3Q9NQW8 809 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 ABCC13Q9NSE7 274 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 ARMCX3Q9UH62 379 aaPredicted RBP14.26□□□□□ -0.13
TRIM28-211ENST00000597968 RASAL2Q9UJF2 1139 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 STOML2Q9UJZ1 356 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 AGO1Q9UL18 857 aaKnown RBP14.26□□□□□ -0.13
TRIM28-211ENST00000597968 WASF3Q9UPY6 502 aa14.26□□□□□ -0.13
TRIM28-211ENST00000597968 CNOT1A5YKK6 2376 aaKnown RBP14.26□□□□□ -0.13
TRIM28-211ENST00000597968 GOLGA6L4A6NEF3 574 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 ARHGAP33O14559 1287 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 MDM4O15151 490 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 OPHN1O60890 802 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 IGLV3-19P01714 112 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 PAEPP09466 180 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 VDRP11473 427 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 CD6P30203 668 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 TKTL1P51854 596 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 CETN1Q12798 172 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 EFEMP1Q12805 493 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 STIM1Q13586 685 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 TRIP4Q15650 581 aaPredicted RBP14.25□□□□□ -0.13
TRIM28-211ENST00000597968 ARMCX6Q7L4S7 300 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 FRMD1Q8N878 549 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 PIWIL1Q96J94 861 aaKnown RBP14.25□□□□□ -0.13
TRIM28-211ENST00000597968 ACOX2Q99424 681 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 FBRSQ9HAH7 460 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 LRRC4Q9HBW1 653 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 ITM2CQ9NQX7 267 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 DNAAF2Q9NVR5 837 aaKnown RBP14.25□□□□□ -0.13
TRIM28-211ENST00000597968 ELOVL2Q9NXB9 296 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 CACNA2D2Q9NY47 1150 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 USP36Q9P275 1121 aaKnown RBP14.25□□□□□ -0.13
TRIM28-211ENST00000597968 NUDT5Q9UKK9 219 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 TSPAN16Q9UKR8 245 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 STON1Q9Y6Q2 735 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 CACNA1BQ00975 2339 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 ASPMQ8IZT6 3477 aa14.25□□□□□ -0.13
TRIM28-211ENST00000597968 TNRC6BQ9UPQ9 1833 aaKnown RBP14.25□□□□□ -0.13
TRIM28-211ENST00000597968 MYOFQ9NZM1 2061 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 MYH10P35580 1976 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 P4HA2O15460 535 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 SYNCRIPO60506 623 aaKnown RBP14.24□□□□□ -0.13
TRIM28-211ENST00000597968 CFIP05156 583 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 UAP1L1Q3KQV9 507 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 CBWD6Q4V339 395 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 CBWD3Q5JTY5 395 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 CBWD5Q5RIA9 395 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 MPP7Q5T2T1 576 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 TCERG1LQ5VWI1 586 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 SMYD5Q6GMV2 418 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 KIAA1211LQ6NV74 962 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 DENND1CQ8IV53 801 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 SLC41A1Q8IVJ1 513 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 TRIML1Q8N9V2 468 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 KDF1Q8NAX2 398 aaPredicted RBP14.24□□□□□ -0.13
TRIM28-211ENST00000597968 WFIKKN2Q8TEU8 576 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 RNF139Q8WU17 664 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 DNASE2BQ8WZ79 361 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 IRGQQ8WZA9 623 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 TATDN2Q93075 761 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 HSPA12BQ96MM6 686 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 CEP63Q96MT8 703 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 IPO9Q96P70 1041 aaKnown RBP14.24□□□□□ -0.13
TRIM28-211ENST00000597968 PRDM16Q9HAZ2 1276 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 WSB2Q9NYS7 404 aaPredicted RBP14.24□□□□□ -0.13
TRIM28-211ENST00000597968 CYP8B1Q9UNU6 501 aa14.24□□□□□ -0.13
TRIM28-211ENST00000597968 SLC12A8A0AV02 714 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 PSMA7O14818 248 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 GIPC1O14908 333 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 IRAK2O43187 625 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 KRT37O76014 449 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 WASP42768 502 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 NUCB2P80303 420 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 PNOCQ13519 176 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 GEN1Q17RS7 908 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 FUT11Q495W5 492 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 DCAF17Q5H9S7 520 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-211ENST00000597968 ADGRF1Q5T601 910 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 LCLAT1Q6UWP7 414 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 UNQ6494/PRO21346Q6UXR6 183 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 SIX6OS1Q8N1H7 587 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 RBBP8NLQ8NC74 664 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-211ENST00000597968 DDI1Q8WTU0 396 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 PRCCQ92733 491 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-211ENST00000597968 SMARCE1Q969G3 411 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 SLC35C1Q96A29 364 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 AZIN2Q96A70 460 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 DHTKD1Q96HY7 919 aaPredicted RBP14.23□□□□□ -0.13
TRIM28-211ENST00000597968 ARID3AQ99856 593 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 ULBP1Q9BZM6 244 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 PLK2Q9NYY3 685 aa14.23□□□□□ -0.13
TRIM28-211ENST00000597968 NEUROG3Q9Y4Z2 214 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms