RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 FSBPO95073 299 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 GARTP22102 1010 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 GRIA4P48058 902 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 MFAP3P55082 362 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 CDH8P55286 799 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 ZNF234Q14588 700 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 DUOXA2Q1HG44 320 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 ARHGAP40Q5TG30 622 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 FBXL19Q6PCT2 694 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 CCDC73Q6ZRK6 1079 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 ERICH1Q86X53 443 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 SYCP3Q8IZU3 236 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 B3GALNT2Q8NCR0 500 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 HVCN1Q96D96 273 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 MED10Q9BTT4 135 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 OSER1Q9NX31 292 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 EXOC7Q9UPT5 735 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 PCDHGA1Q9Y5H4 931 aa14.49□□□□□ -0.09
SHKBP1-208ENST00000595726 A0A1B0GTQ1 180 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 TACC1O75410 805 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 WISP1O95388 367 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 GCNT3O95395 438 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 EPHX1P07099 455 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 STAT6P42226 847 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 SV2BQ7L1I2 683 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 TRAPPC11Q7Z392 1133 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 ADAT2Q7Z6V5 191 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 CBWD2Q8IUF1 395 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 EID2Q8N6I1 236 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 DNAJC19Q96DA6 116 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 OSGEPQ9NPF4 335 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 CLEC4EQ9ULY5 219 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 SLC27A6Q9Y2P4 619 aa14.48□□□□□ -0.09
SHKBP1-208ENST00000595726 FAM92AA1XBS5 289 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 TSPAN3O60637 253 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 CUTAO60888 179 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 BEST1O76090 585 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 PRPF6O94906 941 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 CD27P26842 260 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 ACADVLP49748 655 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 ZNF132P52740 706 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 SRSF1Q07955 248 aaKnown RBP eCLIP14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 ORC1Q13415 861 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 SHBQ15464 509 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 INAVAQ3KP66 663 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 WDR72Q3MJ13 1102 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 TMEM215Q68D42 235 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 ATL3Q6DD88 541 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 SHC4Q6S5L8 630 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 FAM35AQ86V20 835 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 GPD1LQ8N335 351 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 PDILTQ8N807 584 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 ZNF366Q8N895 744 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 ZMIZ2Q8NF64 920 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 ELMO3Q96BJ8 720 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 LGMNQ99538 433 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 ORAI3Q9BRQ5 295 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 PANK2Q9BZ23 570 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 CIPCQ9C0C6 399 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 PCED1AQ9H1Q7 454 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 ELOVL2Q9NXB9 296 aa14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 LSM7Q9UK45 103 aaKnown RBP14.47□□□□□ -0.09
SHKBP1-208ENST00000595726 PAPSS1O43252 624 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 SLC28A2O43868 658 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 AP1G2O75843 785 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 SEMA4FO95754 770 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 KLKB1P03952 638 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 C6P13671 934 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 ACTN2P35609 894 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 ATP5C1P36542 298 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 DNM1Q05193 864 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 E2F4Q16254 413 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 TBC1D25Q3MII6 688 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 FYB2Q5VWT5 728 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 SERPINA13PQ6UXR4 307 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 Q6ZNB5 142 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 RBBP8NLQ8NC74 664 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 TSC1Q92574 1164 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 PIWIL1Q96J94 861 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 SMOQ99835 787 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 LHX5Q9H2C1 402 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 NMUR1Q9HB89 426 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 DMAP1Q9NPF5 467 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 NXF1Q9UBU9 619 aaKnown RBP14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 ZDHHC9Q9Y397 364 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 MYLKQ15746 1914 aa14.46□□□□□ -0.09
SHKBP1-208ENST00000595726 COL5A1P20908 1838 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 FRMD3A2A2Y4 597 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 ZNF233A6NK53 670 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 NPC1O15118 1278 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 PENKP01210 267 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 WNT1P04628 370 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 ITGAVP06756 1048 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 C1SP09871 688 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 ABCB4P21439 1286 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 GLDCP23378 1020 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 C21orf59P57076 290 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 TNNC1P63316 161 aa14.45□□□□□ -0.1
SHKBP1-208ENST00000595726 RHDQ02161 417 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms