RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ZPBP2Q6X784 338 aa13.54□□□□□ -0.24
SCAF1-202ENST00000595242 DCP1BQ8IZD4 617 aaKnown RBP13.54□□□□□ -0.24
SCAF1-202ENST00000595242 ADGRG2Q8IZP9 1017 aa13.54□□□□□ -0.24
SCAF1-202ENST00000595242 TRMT2BQ96GJ1 504 aaKnown RBP13.54□□□□□ -0.24
SCAF1-202ENST00000595242 MYRFLQ96LU7 910 aa13.54□□□□□ -0.24
SCAF1-202ENST00000595242 WDR24Q96S15 920 aa13.54□□□□□ -0.24
SCAF1-202ENST00000595242 TSPAN18Q96SJ8 248 aa13.54□□□□□ -0.24
SCAF1-202ENST00000595242 TMLHEQ9NVH6 421 aa13.54□□□□□ -0.24
SCAF1-202ENST00000595242 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
SCAF1-202ENST00000595242 CALCOCO1Q9P1Z2 691 aa13.54□□□□□ -0.24
SCAF1-202ENST00000595242 ARHGAP26Q9UNA1 814 aa13.54□□□□□ -0.24
SCAF1-202ENST00000595242 TP53BP1Q12888 1972 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-202ENST00000595242 IGHV1OR15-9A0A0B4J2B8 117 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 FAM149AA5PLN7 773 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 CAPN9O14815 690 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 PMM2O15305 246 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 DKK1O94907 266 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 GNSP15586 552 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 CASQ1P31415 396 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 TNFRSF4P43489 277 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 VAV2P52735 878 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 ZXDBP98169 803 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 ENPEPQ07075 957 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 TUBB2AQ13885 445 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 ENOX2Q16206 610 aaKnown RBP13.53□□□□□ -0.24
SCAF1-202ENST00000595242 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 GBP6Q6ZN66 633 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 RRAGAQ7L523 313 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 PDCD7Q8N8D1 485 aaKnown RBP13.53□□□□□ -0.24
SCAF1-202ENST00000595242 TMEM161BQ8NDZ6 487 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 ZNF419Q96HQ0 510 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-202ENST00000595242 TUBB2BQ9BVA1 445 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 ZDHHC5Q9C0B5 715 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 SIX2Q9NPC8 291 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 SUSD2Q9UGT4 822 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 KCNG1Q9UIX4 513 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 FRMD4BQ9Y2L6 1034 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 ATP8B3O60423 1300 aa13.53□□□□□ -0.24
SCAF1-202ENST00000595242 A0A0U1RQJ8 604 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 ANO9A1A5B4 782 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 GOLGA8CPA6NN73 597 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 H0YCG3 227 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 P4HA2O15460 535 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 IPO7O95373 1038 aaKnown RBP13.52□□□□□ -0.25
SCAF1-202ENST00000595242 SERPING1P05155 500 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 CYP2F1P24903 491 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 PON1P27169 355 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 ANXA13P27216 316 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 MAOBP27338 520 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 EIF2DP41214 584 aaKnown RBP13.52□□□□□ -0.25
SCAF1-202ENST00000595242 GRIA2P42262 883 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 SMTNP53814 917 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 RPL10AP62906 217 aaKnown RBP13.52□□□□□ -0.25
SCAF1-202ENST00000595242 KDSRQ06136 332 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 DHCR24Q15392 516 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 EXOC3L4Q17RC7 722 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 SYCP2LQ5T4T6 812 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 KLHDC7AQ5VTJ3 777 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 SFMBT2Q5VUG0 894 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 JADE1Q6IE81 842 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 INTS8Q75QN2 995 aaKnown RBP13.52□□□□□ -0.25
SCAF1-202ENST00000595242 C12orf40Q86WS4 652 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 LURAP1LQ8IV03 231 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 SYCP3Q8IZU3 236 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 EHBP1Q8NDI1 1231 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 BAHD1Q8TBE0 780 aaPredicted RBP13.52□□□□□ -0.25
SCAF1-202ENST00000595242 ANKRD7Q92527 254 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 FAM212AQ96EL1 285 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 FCRL3Q96P31 734 aaPredicted RBP13.52□□□□□ -0.25
SCAF1-202ENST00000595242 TSGA10Q9BZW7 698 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 IKZF4Q9H2S9 585 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 RPF1Q9H9Y2 349 aaKnown RBP13.52□□□□□ -0.25
SCAF1-202ENST00000595242 PRDM16Q9HAZ2 1276 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 IL21RQ9HBE5 538 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 LZTFL1Q9NQ48 299 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 ARHGEF4Q9NR80 690 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 CYP8B1Q9UNU6 501 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 MRFAP1Q9Y605 127 aa13.52□□□□□ -0.25
SCAF1-202ENST00000595242 LEFTY2O00292 366 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 PJA2O43164 708 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 NDUFS2O75306 463 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 ZNF217O75362 1048 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 ADRB2P07550 413 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 PRKCIP41743 596 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 FMO5P49326 533 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 KIF11P52732 1056 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 POLR2FP61218 127 aaKnown RBP13.51□□□□□ -0.25
SCAF1-202ENST00000595242 NFE2Q16621 373 aaPredicted RBP13.51□□□□□ -0.25
SCAF1-202ENST00000595242 KYAT1Q16773 422 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 DCAF17Q5H9S7 520 aaPredicted RBP13.51□□□□□ -0.25
SCAF1-202ENST00000595242 TXLNBQ8N3L3 684 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 JAKMIP2Q96AA8 810 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 CCDC42Q96M95 316 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 CDC6Q99741 560 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 TM7SF3Q9NS93 570 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 PIEZO2Q9H5I5 2752 aa13.51□□□□□ -0.25
SCAF1-202ENST00000595242 KRT86O43790 486 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 FAM189A1O60320 539 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 EXOC3O60645 756 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms