RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 POF1BQ8WVV4 589 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 OVCA2Q8WZ82 227 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 SERPINB11Q96P15 392 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 KLHL5Q96PQ7 755 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 FAM118BQ9BPY3 351 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 MAK16Q9BXY0 300 aaKnown RBP21.58■■□□□ 1.05
PNKP-203ENST00000593946 ENTPD7Q9NQZ7 604 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 TMEM51Q9NW97 253 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 SFMBT1Q9UHJ3 866 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 NUDT5Q9UKK9 219 aa21.58■■□□□ 1.05
PNKP-203ENST00000593946 FAM187AA6NFU0 413 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 ZSCAN5CA6NGD5 496 aaPredicted RBP21.58■■□□□ 1.04
PNKP-203ENST00000593946 APOC4-APOC2K7ER74 178 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 TGM5O43548 720 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 LIASO43766 372 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 APOC2P02655 101 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 RB1P06400 928 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 CA3P07451 260 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 RARGP13631 454 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 MCM3P25205 808 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 BRMS1LQ5PSV4 323 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 SLC9A4Q6AI14 798 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 LILRA6Q6PI73 481 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 JAMLQ86YT9 394 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 PQLC3Q8N755 202 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 TTC13Q8NBP0 860 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 TRMT2BQ96GJ1 504 aaKnown RBP21.58■■□□□ 1.04
PNKP-203ENST00000593946 CSPG4P5Q96PW8 444 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 HINFPQ9BQA5 517 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 GDF3Q9NR23 364 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 TLR9Q9NR96 1032 aa21.58■■□□□ 1.04
PNKP-203ENST00000593946 OLA1Q9NTK5 396 aaKnown RBP21.58■■□□□ 1.04
PNKP-203ENST00000593946 CWC15Q9P013 229 aaKnown RBP21.58■■□□□ 1.04
PNKP-203ENST00000593946 C2orf71A6NGG8 1288 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 MSI1O43347 362 aaKnown RBP21.57■■□□□ 1.04
PNKP-203ENST00000593946 GUCY2DQ02846 1103 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 TWF1Q12792 350 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 SEMA3BQ13214 749 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 VEPH1Q14D04 833 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 SNX30Q5VWJ9 437 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 MRPL43Q8N983 215 aaKnown RBP21.57■■□□□ 1.04
PNKP-203ENST00000593946 PDZD8Q8NEN9 1154 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 ACTL9Q8TC94 416 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 HAUS1Q96CS2 278 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 EMILIN2Q9BXX0 1053 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 FRMD8P1Q9BZ68 369 aaPredicted RBP21.57■■□□□ 1.04
PNKP-203ENST00000593946 TKTL2Q9H0I9 626 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 ARHGEF38Q9NXL2 777 aa21.57■■□□□ 1.04
PNKP-203ENST00000593946 CCDC151A5D8V7 595 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 TNFRSF8P28908 595 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 ARL4AP40617 200 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 OTUD4Q01804 1114 aaKnown RBP21.56■■□□□ 1.04
PNKP-203ENST00000593946 NNTQ13423 1086 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 PPP2R5DQ14738 602 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 BRD3Q15059 726 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 PLPP4Q5VZY2 271 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 ZNF276Q8N554 614 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 PLD5Q8N7P1 536 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 SLC35B2Q8TB61 432 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.56■■□□□ 1.04
PNKP-203ENST00000593946 SEC14L1Q92503 715 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 NKD2Q969F2 451 aaPredicted RBP21.56■■□□□ 1.04
PNKP-203ENST00000593946 TRIM51Q9BSJ1 452 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 EPB41L5Q9HCM4 733 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 SAE1Q9UBE0 346 aaPredicted RBP21.56■■□□□ 1.04
PNKP-203ENST00000593946 DNPEPQ9ULA0 475 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 TLR6Q9Y2C9 796 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 PCDHA11Q9Y5I1 949 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 ATG2AQ2TAZ0 1938 aa21.56■■□□□ 1.04
PNKP-203ENST00000593946 HIDE1A8MVS5 230 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 GOT1P17174 413 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 CCR1P32246 355 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 BYSLQ13895 437 aaKnown RBP21.55■■□□□ 1.04
PNKP-203ENST00000593946 OASLQ15646 514 aaKnown RBP21.55■■□□□ 1.04
PNKP-203ENST00000593946 IFT20Q8IY31 132 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 ATL2Q8NHH9 583 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 GRK7Q8WTQ7 553 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 RNF34Q969K3 372 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 SAMD11Q96NU1 681 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 ARGLU1Q9NWB6 273 aaPredicted RBP21.55■■□□□ 1.04
PNKP-203ENST00000593946 FEZ2Q9UHY8 353 aaPredicted RBP21.55■■□□□ 1.04
PNKP-203ENST00000593946 RASAL2Q9UJF2 1139 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 TRANK1O15050 2925 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 H3BRJ5 948 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 APOL1O14791 398 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 ECEL1O95672 775 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 SPATA31D3P0C874 917 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 PECAM1P16284 738 aaPredicted RBP21.55■■□□□ 1.04
PNKP-203ENST00000593946 TGM2P21980 687 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 EPHB3P54753 998 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 VCPP55072 806 aaKnown RBP21.55■■□□□ 1.04
PNKP-203ENST00000593946 PLD1Q13393 1074 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 CAMK1Q14012 370 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 SPATA31D4Q6ZUB0 917 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 PSMG2Q969U7 264 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 SLC39A13Q96H72 371 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 ZNF512Q96ME7 567 aaPredicted RBP21.55■■□□□ 1.04
PNKP-203ENST00000593946 TGS1Q96RS0 853 aaKnown RBP21.55■■□□□ 1.04
PNKP-203ENST00000593946 RAB17Q9H0T7 212 aa21.55■■□□□ 1.04
PNKP-203ENST00000593946 UTP11Q9Y3A2 253 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms