RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RAPGEF5Q92565 580 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 ATOH1Q92858 354 aaPredicted RBP14.01□□□□□ -0.17
VMP1-217ENST00000593168 RNF25Q96BH1 459 aaPredicted RBP14.01□□□□□ -0.17
VMP1-217ENST00000593168 SLITRK1Q96PX8 696 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 PEBP4Q96S96 227 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 TTLL2Q9BWV7 592 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 ADAM33Q9BZ11 813 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 RAB6CQ9H0N0 254 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 S1PR5Q9H228 398 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 CYP4F11Q9HBI6 524 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 TLR9Q9NR96 1032 aa14.01□□□□□ -0.17
VMP1-217ENST00000593168 ZFHX2Q9C0A1 2572 aaPredicted RBP14□□□□□ -0.17
VMP1-217ENST00000593168 GOLGA6L10A0A0M3HER8 536 aa14□□□□□ -0.17
VMP1-217ENST00000593168 LRRD1A4D1F6 860 aa14□□□□□ -0.17
VMP1-217ENST00000593168 C3orf70A6NLC5 250 aaPredicted RBP14□□□□□ -0.17
VMP1-217ENST00000593168 SOAT2O75908 522 aa14□□□□□ -0.17
VMP1-217ENST00000593168 CNPP09543 421 aaKnown RBP14□□□□□ -0.17
VMP1-217ENST00000593168 ARSEP51690 589 aa14□□□□□ -0.17
VMP1-217ENST00000593168 AIF1P55008 147 aa14□□□□□ -0.17
VMP1-217ENST00000593168 USP46P62068 366 aa14□□□□□ -0.17
VMP1-217ENST00000593168 DEUP1Q05D60 604 aa14□□□□□ -0.17
VMP1-217ENST00000593168 C2orf54Q08AI8 447 aa14□□□□□ -0.17
VMP1-217ENST00000593168 IFRD2Q12894 506 aaPredicted RBP14□□□□□ -0.17
VMP1-217ENST00000593168 PDK2Q15119 407 aa14□□□□□ -0.17
VMP1-217ENST00000593168 ERCC6LQ2NKX8 1250 aa14□□□□□ -0.17
VMP1-217ENST00000593168 KCNT1Q5JUK3 1230 aa14□□□□□ -0.17
VMP1-217ENST00000593168 TEX35Q5T0J7 233 aa14□□□□□ -0.17
VMP1-217ENST00000593168 ERMARDQ5T6L9 678 aa14□□□□□ -0.17
VMP1-217ENST00000593168 MFSD7Q6UXD7 560 aa14□□□□□ -0.17
VMP1-217ENST00000593168 VSIG1Q86XK7 387 aa14□□□□□ -0.17
VMP1-217ENST00000593168 CCDC50Q8IVM0 306 aa14□□□□□ -0.17
VMP1-217ENST00000593168 KCTD6Q8NC69 237 aa14□□□□□ -0.17
VMP1-217ENST00000593168 FAM71BQ8TC56 605 aa14□□□□□ -0.17
VMP1-217ENST00000593168 EDEM1Q92611 657 aa14□□□□□ -0.17
VMP1-217ENST00000593168 APOL5Q9BWW9 433 aa14□□□□□ -0.17
VMP1-217ENST00000593168 EMILIN2Q9BXX0 1053 aa14□□□□□ -0.17
VMP1-217ENST00000593168 NMUR1Q9HB89 426 aa14□□□□□ -0.17
VMP1-217ENST00000593168 RBM12Q9NTZ6 932 aaKnown RBP14□□□□□ -0.17
VMP1-217ENST00000593168 CLIC5Q9NZA1 410 aa14□□□□□ -0.17
VMP1-217ENST00000593168 A0A1W2PQH9 124 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 H0Y858 1186 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 TJP3O95049 919 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 C1RP00736 705 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 IGLV3-25P01717 112 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 ADH1AP07327 375 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 ZDHHC11BP0C7U3 371 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 CSH1P0DML2 217 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 CSH2P0DML3 217 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 RALAP11233 206 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 SP100P23497 879 aaPredicted RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 GBP1P32455 592 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 CDKN2BP42772 138 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 ALDH1A3P47895 512 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 PITX1P78337 314 aaPredicted RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 TAF10Q12962 218 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 KLF1Q13351 362 aaPredicted RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 EIF4EBP2Q13542 120 aaPredicted RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 SIX1Q15475 284 aaPredicted RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 CYP1B1Q16678 543 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 SMTNL2Q2TAL5 461 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 GLE1Q53GS7 698 aaKnown RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 TFDP3Q5H9I0 405 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 PLPP4Q5VZY2 271 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 CCDC70Q6NSX1 233 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 ANKRD54Q6NXT1 300 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 MSANTD2Q6P1R3 559 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 LILRA6Q6PI73 481 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 SYCE2Q6PIF2 218 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 TMEM184AQ6ZMB5 413 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 MAP7D3Q8IWC1 876 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 ZDHHC14Q8IZN3 488 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 ZNF276Q8N554 614 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 MRPL43Q8N983 215 aaKnown RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 SLC7A14Q8TBB6 771 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 GPR152Q8TDT2 470 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 DQX1Q8TE96 717 aaKnown RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 GIPC2Q8TF65 315 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 RNF139Q8WU17 664 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 OVCA2Q8WZ82 227 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 HSPH1Q92598 858 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 FBXO32Q969P5 355 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 NTAN1Q96AB6 310 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 MYRFLQ96LU7 910 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 RIPOR3Q96MK2 946 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 KLHL5Q96PQ7 755 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 CDCA3Q99618 268 aaPredicted RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 TCF25Q9BQ70 676 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 SNRNP25Q9BV90 132 aaKnown RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 AP1M1Q9BXS5 423 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 WDR6Q9NNW5 1121 aaKnown RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 TLR8Q9NR97 1041 aaKnown RBP13.99□□□□□ -0.17
VMP1-217ENST00000593168 KLHL11Q9NVR0 708 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 CALCOCO1Q9P1Z2 691 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 CDH22Q9UJ99 828 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 GREB1Q4ZG55 1949 aa13.99□□□□□ -0.17
VMP1-217ENST00000593168 hCG_1818297A0A087WSY0 165 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.98□□□□□ -0.17
VMP1-217ENST00000593168 ZNF487B1APH4 448 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 ADRA1BP35368 520 aa13.98□□□□□ -0.17
VMP1-217ENST00000593168 CXCR3P49682 368 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms