RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 CNOT11Q9UKZ1 510 aaKnown RBP7.11□□□□□ -1.27
VMP1-215ENST00000592619 SH2B3Q9UQQ2 575 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 ZBTB1Q9Y2K1 713 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 ARHGAP5Q13017 1502 aa7.11□□□□□ -1.27
VMP1-215ENST00000592619 FAM90A20PA6NIJ5 464 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 KIF28PB7ZC32 967 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 PSMD9O00233 223 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 ERBB2P04626 1255 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 PDHA1P08559 390 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 TMEM225BP0DP42 221 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 LAG3P18627 525 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 NR4A1P22736 598 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 GSTM5P46439 218 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 EIF5P55010 431 aaKnown RBP7.1□□□□□ -1.27
VMP1-215ENST00000592619 EIF4A1P60842 406 aaKnown RBP7.1□□□□□ -1.27
VMP1-215ENST00000592619 SF3A3Q12874 501 aaKnown RBP eCLIP7.1□□□□□ -1.27
VMP1-215ENST00000592619 ANKRD1Q15327 319 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 NRN1LQ496H8 165 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 AASDHQ4L235 1098 aaPredicted RBP7.1□□□□□ -1.27
VMP1-215ENST00000592619 FAAH2Q6GMR7 532 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 C1orf122Q6ZSJ8 110 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 RASGRP2Q7LDG7 609 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 MAVSQ7Z434 540 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 ZNF276Q8N554 614 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 TTC9BQ8N6N2 239 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 CEP70Q8NHQ1 597 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 SLC22A17Q8WUG5 538 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 HMGB4Q8WW32 186 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 LPIN2Q92539 896 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 ANP32EQ9BTT0 268 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 SERHL2Q9H4I8 314 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 CHODLQ9H9P2 273 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 KCNK9Q9NPC2 374 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 PARPBPQ9NWS1 579 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 CEP72Q9P209 647 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 KCND3Q9UK17 655 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 TESMINQ9Y4I5 508 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 RICTORQ6R327 1708 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 AKNAQ7Z591 1439 aa7.1□□□□□ -1.27
VMP1-215ENST00000592619 LOC105369274A0A096LPK9 316 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 LOC102723532A0A0G2JNH3 316 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 LPXNO60711 386 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 KRT38O76015 456 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 SPDEFO95238 335 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 ONECUT2O95948 504 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 CD4P01730 458 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 LIPAP38571 399 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 LIFRP42702 1097 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 MAGEA10P43363 369 aaPredicted RBP7.09□□□□□ -1.27
VMP1-215ENST00000592619 MMP14P50281 582 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 R3HDM1Q15032 1099 aaKnown RBP7.09□□□□□ -1.27
VMP1-215ENST00000592619 DLGAP5Q15398 846 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 CTXN3Q4LDR2 81 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 FBLN7Q53RD9 439 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 ZNF569Q5MCW4 686 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 ZNF618Q5T7W0 954 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 CCDC144NLQ6NUI1 221 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 VWA1Q6PCB0 445 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 OR4N4Q8N0Y3 316 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 PDILTQ8N807 584 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 C1orf131Q8NDD1 294 aaKnown RBP7.09□□□□□ -1.27
VMP1-215ENST00000592619 SSH3Q8TE77 659 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 FKBP10Q96AY3 582 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 PTCD3Q96EY7 689 aaKnown RBP7.09□□□□□ -1.27
VMP1-215ENST00000592619 PGBD1Q96JS3 809 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 ALG8Q9BVK2 526 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 TBCCD1Q9NVR7 557 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 RRP7AQ9Y3A4 280 aaKnown RBP7.09□□□□□ -1.27
VMP1-215ENST00000592619 ADGRL1O94910 1474 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 NCOA2Q15596 1464 aa7.09□□□□□ -1.27
VMP1-215ENST00000592619 FRMPD1Q5SYB0 1578 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 ABCC1P33527 1531 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 ZMYM4Q5VZL5 1548 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 GPATCH8Q9UKJ3 1502 aaKnown RBP7.08□□□□□ -1.28
VMP1-215ENST00000592619 SLC38A8A6NNN8 435 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 B4E171 279 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 TIMM44O43615 452 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 VNN1O95497 513 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 DRD1P21728 446 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 KRT9P35527 623 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 TSPAN7P41732 249 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 RBM5P52756 815 aaKnown RBP eCLIP7.08□□□□□ -1.28
VMP1-215ENST00000592619 SLC25A3Q00325 362 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 GUCY1B3Q02153 619 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 SEMA3BQ13214 749 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 SF3B3Q15393 1217 aaKnown RBP7.08□□□□□ -1.28
VMP1-215ENST00000592619 P3H1Q32P28 736 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 ZNF585AQ6P3V2 769 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 GET4Q7L5D6 327 aaPredicted RBP7.08□□□□□ -1.28
VMP1-215ENST00000592619 SYT13Q7L8C5 426 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 GPR149Q86SP6 731 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 HEATR4Q86WZ0 1026 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.08□□□□□ -1.28
VMP1-215ENST00000592619 MYCBPAPQ8TBZ2 947 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 CTHRC1Q96CG8 243 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 MCRS1Q96EZ8 462 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 WDYHV1Q96HA8 205 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 REEP2Q9BRK0 252 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 MECRQ9BV79 373 aa7.08□□□□□ -1.28
VMP1-215ENST00000592619 KLC2Q9H0B6 622 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms