RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 PCDHGC3Q9UN70 934 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 SIK3Q9Y2K2 1263 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 CEP83Q9Y592 693 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 NEDD8-MDP1E9PL57 170 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 TRIM24O15164 1050 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 SART1O43290 800 aaKnown RBP14.54□□□□□ -0.08
CLIP3-205ENST00000592017 TULP3O75386 442 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 GFPT2O94808 682 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 KLKB1P03952 638 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 APODP05090 189 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 NCAM1P13591 858 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 CYP11B1P15538 503 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 GRIA2P42262 883 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 KIR2DL1P43626 348 aaPredicted RBP14.54□□□□□ -0.08
CLIP3-205ENST00000592017 MRPS21P82921 87 aaKnown RBP14.54□□□□□ -0.08
CLIP3-205ENST00000592017 RSPO4Q2I0M5 234 aaPredicted RBP14.54□□□□□ -0.08
CLIP3-205ENST00000592017 ZSCAN23Q3MJ62 389 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 APTXQ7Z2E3 356 aaKnown RBP14.54□□□□□ -0.08
CLIP3-205ENST00000592017 KBTBD6Q86V97 674 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 DENND1CQ8IV53 801 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 ALLCQ8N6M5 410 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 CCDC26Q8TAB7 109 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 STK32AQ8WU08 396 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 P2RY11Q96G91 374 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 NOX5Q96PH1 765 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 CPXM1Q96SM3 734 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 SLC4A5Q9BY07 1137 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 SYNCQ9H7C4 482 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 DLL3Q9NYJ7 618 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 EBF1Q9UH73 591 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 HCN2Q9UL51 889 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 USP18Q9UMW8 372 aa14.54□□□□□ -0.08
CLIP3-205ENST00000592017 SDK1Q7Z5N4 2213 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.53□□□□□ -0.08
CLIP3-205ENST00000592017 CAPN9O14815 690 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 DCLK1O15075 740 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 PAPSS1O43252 624 aaPredicted RBP14.53□□□□□ -0.08
CLIP3-205ENST00000592017 TIE1P35590 1138 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 TNFRSF4P43489 277 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 TPM4P67936 248 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 SKOR2Q2VWA4 1001 aaPredicted RBP14.53□□□□□ -0.08
CLIP3-205ENST00000592017 TMEM92Q6UXU6 159 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 Q6ZNB5 142 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 CACNA2D4Q7Z3S7 1137 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.53□□□□□ -0.08
CLIP3-205ENST00000592017 LUZP1Q86V48 1076 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 WDTC1Q8N5D0 677 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 IL17RCQ8NAC3 791 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 TXNDC5Q8NBS9 432 aaKnown RBP14.53□□□□□ -0.08
CLIP3-205ENST00000592017 IPO4Q8TEX9 1081 aaKnown RBP14.53□□□□□ -0.08
CLIP3-205ENST00000592017 PLD4Q96BZ4 506 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 PPP1R13BQ96KQ4 1090 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 BBS2Q9BXC9 721 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 DCLK3Q9C098 648 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 LHX5Q9H2C1 402 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 CBX8Q9HC52 389 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 ZDHHC4Q9NPG8 344 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 DEC1Q9P2X7 70 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 AGO1Q9UL18 857 aaKnown RBP14.53□□□□□ -0.08
CLIP3-205ENST00000592017 MMP17Q9ULZ9 603 aa14.53□□□□□ -0.08
CLIP3-205ENST00000592017 TBC1D3BA6NDS4 549 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 SGK1O00141 431 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 ADAM23O75077 832 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 KLF8O95600 359 aaPredicted RBP14.52□□□□□ -0.09
CLIP3-205ENST00000592017 SOX5P35711 763 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 RPL34P49207 117 aaKnown RBP14.52□□□□□ -0.09
CLIP3-205ENST00000592017 HARS2P49590 506 aaKnown RBP14.52□□□□□ -0.09
CLIP3-205ENST00000592017 LMNB2Q03252 620 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 IQCB1Q15051 598 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 CRY1Q16526 586 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 FILIP1LQ4L180 1135 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 SMYD5Q6GMV2 418 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 OR6B2Q6IFH4 312 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 MSANTD2Q6P1R3 559 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 TMEM110Q86TL2 294 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 NOP9Q86U38 636 aaKnown RBP14.52□□□□□ -0.09
CLIP3-205ENST00000592017 TMEM35BQ8NCS4 154 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 TSTD1Q8NFU3 115 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 ADAM32Q8TC27 787 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 EPS8L1Q8TE68 723 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 PIWIL1Q96J94 861 aaKnown RBP14.52□□□□□ -0.09
CLIP3-205ENST00000592017 ERGIC2Q96RQ1 377 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 SEMA4GQ9NTN9 838 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 DNAJC17Q9NVM6 304 aaKnown RBP14.52□□□□□ -0.09
CLIP3-205ENST00000592017 PLK2Q9NYY3 685 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 MARK1Q9P0L2 795 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 NAALADL1Q9UQQ1 740 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 INVSQ9Y283 1065 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 ZNF510Q9Y2H8 683 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 HBS1LQ9Y450 684 aaKnown RBP14.52□□□□□ -0.09
CLIP3-205ENST00000592017 NCOR2Q9Y618 2525 aa14.52□□□□□ -0.09
CLIP3-205ENST00000592017 ATG2BQ96BY7 2078 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 LRRC10BA6NIK2 292 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 TEX33O43247 280 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 LRP3O75074 770 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 SERPINC1P01008 464 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 ERBB2P04626 1255 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 MMEP08473 750 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 TYRP14679 529 aa14.51□□□□□ -0.09
CLIP3-205ENST00000592017 STAT1P42224 750 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms