RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 SEMA6DQ8NFY4 1073 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 DPF1Q92782 380 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 KAZALD1Q96I82 304 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 CCDC17Q96LX7 622 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 HS6ST2Q96MM7 605 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 PAIP2Q9BPZ3 127 aaKnown RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 NUDT22Q9BRQ3 303 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 CINPQ9BW66 212 aaPredicted RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 YY1AP1Q9H869 796 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 HELLSQ9NRZ9 838 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 FZD4Q9ULV1 537 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 VPS4AQ9UN37 437 aa3.99□□□□□ -1.77
VMP1-212ENST00000591782 SCAF8Q9UPN6 1271 aaKnown RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 CFAP65Q6ZU64 1925 aaKnown RBP3.99□□□□□ -1.77
VMP1-212ENST00000591782 LMTK3Q96Q04 1460 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 PNMA6EA0A0J9YXQ4 647 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.98□□□□□ -1.77
VMP1-212ENST00000591782 H3BNC9 293 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 FYB1O15117 783 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 SKAP2O75563 359 aaPredicted RBP3.98□□□□□ -1.77
VMP1-212ENST00000591782 PRKCGP05129 697 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 ALADP13716 330 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 ZNF37AP17032 561 aaPredicted RBP3.98□□□□□ -1.77
VMP1-212ENST00000591782 KLRK1P26718 216 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 GALNSP34059 522 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 GSTM5P46439 218 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 ALDH18A1P54886 795 aaKnown RBP3.98□□□□□ -1.77
VMP1-212ENST00000591782 TUBA4AP68366 448 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 RAE1P78406 368 aaKnown RBP3.98□□□□□ -1.77
VMP1-212ENST00000591782 ICA1Q05084 483 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 SEMA3BQ13214 749 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 TRIM14Q14142 442 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 KCNB1Q14721 858 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 GRM4Q14833 912 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 LARS2Q15031 903 aaKnown RBP3.98□□□□□ -1.77
VMP1-212ENST00000591782 ZRSR2Q15696 482 aaKnown RBP3.98□□□□□ -1.77
VMP1-212ENST00000591782 CCDC144NLQ6NUI1 221 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 MSANTD2Q6P1R3 559 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 PTF1AQ7RTS3 328 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 SMAP1Q8IYB5 467 aaPredicted RBP3.98□□□□□ -1.77
VMP1-212ENST00000591782 FAM71BQ8TC56 605 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 ADAMTS18Q8TE60 1221 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 FYTTD1Q96QD9 318 aaKnown RBP3.98□□□□□ -1.77
VMP1-212ENST00000591782 TSPYL1Q9H0U9 437 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 PDCL3Q9H2J4 239 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 COMMD10Q9Y6G5 202 aa3.98□□□□□ -1.77
VMP1-212ENST00000591782 PRRT4C9JH25 899 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 BTBD19C9JJ37 291 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 UBE2Q2LH0YL09 131 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 M0QZQ0 153 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 CLIC1O00299 241 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 CTIFO43310 598 aaKnown RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 DNPH1O43598 174 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 ITGA5P08648 1049 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 CHRM5P08912 532 aaPredicted RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 CYP2D6P10635 497 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 CYP2A6P11509 494 aaPredicted RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 CD38P28907 300 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 AKT1P31749 480 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 IGHMBP2P38935 993 aaKnown RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 SLC10A2Q12908 348 aaPredicted RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 PTK2BQ14289 1009 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 CSHL1Q14406 222 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 ELF2Q15723 593 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 TUBB8Q3ZCM7 444 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 ZACNQ401N2 412 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 CERKLQ49MI3 558 aaPredicted RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 DNTTIP2Q5QJE6 756 aaKnown RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 RINT1Q6NUQ1 792 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 SYCE2Q6PIF2 218 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 ZNF66Q6ZN08 573 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 KRBA2Q6ZNG9 492 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 KRT27Q7Z3Y8 459 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 TTC30AQ86WT1 665 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 GATAD2AQ86YP4 633 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 ENAHQ8N8S7 591 aaPredicted RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 ATG16L2Q8NAA4 619 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 DDB2Q92466 427 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 MCRS1Q96EZ8 462 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 ASB2Q96Q27 587 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 EIF3CQ99613 913 aaKnown RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 GAR1Q9NY12 217 aaKnown RBP3.97□□□□□ -1.77
VMP1-212ENST00000591782 RAI14Q9P0K7 980 aa3.97□□□□□ -1.77
VMP1-212ENST00000591782 CCDC187A0A096LP49 1063 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 TMEM232C9JQI7 657 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 MASP2O00187 686 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 SYT5O00445 386 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 TRIM38O00635 465 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 FCHO1O14526 889 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 CER1O95813 267 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 LATS1O95835 1130 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 MMP8P22894 467 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 TRAPPC10P48553 1259 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 JAK3P52333 1124 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 WDR5P61964 334 aaKnown RBP3.96□□□□□ -1.78
VMP1-212ENST00000591782 SLC20A2Q08357 652 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 SLC14A1Q13336 389 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 TRIM71Q2Q1W2 868 aaKnown RBP3.96□□□□□ -1.78
VMP1-212ENST00000591782 C4orf46Q504U0 113 aa3.96□□□□□ -1.78
VMP1-212ENST00000591782 DPY19L2P1Q6NXN4 242 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms