RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 SPRYD7Q5W111 196 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 PLPPR4Q7Z2D5 763 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 GPR141Q7Z602 305 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 DDHD1Q8NEL9 900 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 SERPINB11Q96P15 392 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 ADAM33Q9BZ11 813 aa13.69□□□□□ -0.22
SMARCA4-216ENST00000591545 FRMPD4Q14CM0 1322 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 SYNDIG1LA6NDD5 238 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 RASSF9O75901 435 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 TOB1P50616 345 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 OLFML2BQ68BL8 750 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 SCUBE1Q8IWY4 988 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 RIN3Q8TB24 985 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 ZNF507Q8TCN5 953 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 ABHD8Q96I13 439 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 EPS8L2Q9H6S3 715 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 LACTBL1A8MY62 500 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 BTBD19C9JJ37 291 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 CBX4O00257 560 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 PCDH8O95206 1070 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 ITGALP20701 1170 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 ACAT1P24752 427 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 RENBPP51606 427 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 FBXL16Q8N461 479 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 UBE2OQ9C0C9 1292 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 KRT87PA6NCN2 255 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 XPO1O14980 1071 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 TLL1O43897 1013 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 NDST1P52848 882 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 POU4F1Q01851 419 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 TTI2Q6NXR4 508 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 BNC2Q6ZN30 1099 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 CD99L2Q8TCZ2 262 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 PORCNQ9H237 461 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 TMEM134Q9H6X4 195 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 SMPD4Q9NXE4 827 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 TAGLN3Q9UI15 199 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 EIF3LQ9Y262 564 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 LOC100653049A0A140TA62 436 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 KRT34O76011 436 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 KRT75O95678 551 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 ATP5BP06576 529 aaKnown RBP13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 ADH1AP07327 375 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 FCGR1AP12314 374 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 TFDP3Q5H9I0 405 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 NOMO2Q5JPE7 1267 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 C11orf63Q6NUN7 778 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 FAM131BQ86XD5 332 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 INPP5DQ92835 1189 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 ECSITQ9BQ95 431 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 CAAP1Q9H8G2 361 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 CAB39Q9Y376 341 aaPredicted RBP13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 PCDHAC2Q9Y5I4 1007 aa13.68□□□□□ -0.22
SMARCA4-216ENST00000591545 ZW10O43264 779 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 PPP3CCP48454 512 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 SLC39A12Q504Y0 691 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 CDKAL1Q5VV42 579 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 ZDHHC17Q8IUH5 632 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 CCDC60Q8IWA6 550 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 EXD1Q8NHP7 514 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 RSPH1Q8WYR4 309 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 MAML3Q96JK9 1138 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 APOL5Q9BWW9 433 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 ADGRE3Q9BY15 652 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 EXOSC4Q9NPD3 245 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 AP4E1Q9UPM8 1137 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 SCNN1GP51170 649 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 SGCGQ13326 291 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 TRMT5Q32P41 509 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 SLC44A4Q53GD3 710 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 SDR42E2A6NKP2 422 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 SNTNA6NMZ2 147 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 PIK3CDO00329 1044 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 PSMC3P17980 439 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 TGM2P21980 687 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 PTPN4P29074 926 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 ERFP50548 548 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 CCNG2Q16589 344 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 CACHD1Q5VU97 1274 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 ERAP2Q6P179 960 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 DENND1BQ6P3S1 775 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 EPS8L3Q8TE67 593 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 ZFYVE19Q96K21 471 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 SENP8Q96LD8 212 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 GAS2L1Q99501 681 aaPredicted RBP13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 UBIAD1Q9Y5Z9 338 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 ENDOD1O94919 500 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 MAPK1P28482 360 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 TP53BP2Q13625 1128 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 TRIM16LQ309B1 348 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 AGXT2Q9BYV1 514 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 HIPK3Q9H422 1215 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 NMRK1Q9NWW6 199 aa13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 TRMT6Q9UJA5 497 aaKnown RBP13.67□□□□□ -0.22
SMARCA4-216ENST00000591545 DDHD2O94830 711 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 PYGMP11217 842 aa13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 TCN1P20061 433 aaPredicted RBP13.66□□□□□ -0.22
SMARCA4-216ENST00000591545 LRRC74AQ0VAA2 488 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms