RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 BCCIPQ9P287 314 aaKnown RBP eCLIP10.94□□□□□ -0.66
VPS4B-207ENST00000591519 PILRBQ9UKJ0 227 aa10.94□□□□□ -0.66
VPS4B-207ENST00000591519 WASF3Q9UPY6 502 aa10.94□□□□□ -0.66
VPS4B-207ENST00000591519 ZNF510Q9Y2H8 683 aa10.94□□□□□ -0.66
VPS4B-207ENST00000591519 SLC27A6Q9Y2P4 619 aa10.94□□□□□ -0.66
VPS4B-207ENST00000591519 PCNX2A6NKB5 2137 aa10.94□□□□□ -0.66
VPS4B-207ENST00000591519 UPK3BL1B0FP48 263 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 PRRT4C9JH25 899 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 UPK3BL2E5RIL1 263 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 NEDD8-MDP1E9PL57 170 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 AP5Z1O43299 807 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 ZNF217O75362 1048 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 PENKP01210 267 aaPredicted RBP10.93□□□□□ -0.66
VPS4B-207ENST00000591519 KLKB1P03952 638 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 RALAP11233 206 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 HOXB2P14652 356 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 RPIAP49247 311 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 NOVA1P51513 510 aaKnown RBP10.93□□□□□ -0.66
VPS4B-207ENST00000591519 ZNF132P52740 706 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 RAD23BP54727 409 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 COG7P83436 770 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 ST3GAL2Q16842 350 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 TRIM61Q5EBN2 209 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 RAB41Q5JT25 222 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 EGFLAMQ63HQ2 1017 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 ARHGAP17Q68EM7 881 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 SDE2Q6IQ49 451 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 TPGS1Q6ZTW0 290 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 FMR1NBQ8N0W7 255 aaPredicted RBP10.93□□□□□ -0.66
VPS4B-207ENST00000591519 PGBD3Q8N328 593 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 CEP76Q8TAP6 659 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 IPO4Q8TEX9 1081 aaKnown RBP10.93□□□□□ -0.66
VPS4B-207ENST00000591519 SEMA4DQ92854 862 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 TMEM176AQ96HP8 235 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 HEXIM2Q96MH2 286 aaKnown RBP10.93□□□□□ -0.66
VPS4B-207ENST00000591519 ACOX2Q99424 681 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 CISHQ9NSE2 258 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 RAB20Q9NX57 234 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 NUDT5Q9UKK9 219 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 COQ4Q9Y3A0 265 aa10.93□□□□□ -0.66
VPS4B-207ENST00000591519 ASCC3Q8N3C0 2202 aaKnown RBP10.93□□□□□ -0.66
VPS4B-207ENST00000591519 CEP192Q8TEP8 1941 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 IGHV1OR15-9A0A0B4J2B8 117 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 GIPC1O14908 333 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 NPC1O15118 1278 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 ZBTB24O43167 697 aaPredicted RBP10.92□□□□□ -0.66
VPS4B-207ENST00000591519 STX10O60499 249 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 CD58P19256 250 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 CHKAP35790 457 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 DGKGP49619 791 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 ZNF33AQ06730 810 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 ENPP2Q13822 863 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 DUOXA1Q1HG43 343 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 COBLL1Q53SF7 1204 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 C10orf120Q5SQS8 335 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 SH3PXD2AQ5TCZ1 1133 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 LYSMD4Q5XG99 296 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 PM20D1Q6GTS8 502 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 KIAA1211LQ6NV74 962 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 TOGARAM2Q6ZUX3 1019 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 CHPFQ8IZ52 775 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 ARHGAP18Q8N392 663 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 ANKRD52Q8NB46 1076 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 SLC4A11Q8NBS3 891 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 FBXL13Q8NEE6 735 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 ENGASEQ8NFI3 743 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 P2RY11Q96G91 374 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 ZNF419Q96HQ0 510 aaPredicted RBP10.92□□□□□ -0.66
VPS4B-207ENST00000591519 NUSAP1Q9BXS6 441 aaKnown RBP10.92□□□□□ -0.66
VPS4B-207ENST00000591519 DCLK3Q9C098 648 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 CALCOCO1Q9P1Z2 691 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 DACH1Q9UI36 760 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 NAGPAQ9UK23 515 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 SLC6A14Q9UN76 642 aa10.92□□□□□ -0.66
VPS4B-207ENST00000591519 MDM4O15151 490 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 CETN3O15182 167 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 SERPINF2P08697 491 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 ENGP17813 658 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 NDUFV2P19404 249 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 ITPKAP23677 461 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 WASP42768 502 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 SEMA3BQ13214 749 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 ZNF394Q53GI3 561 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 FYB2Q5VWT5 728 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 ISM2Q6H9L7 571 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 RABEPKQ7Z6M1 372 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 PIGZQ86VD9 579 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 FAM217AQ8IXS0 508 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 ZC3H3Q8IXZ2 948 aaKnown RBP10.91□□□□□ -0.66
VPS4B-207ENST00000591519 SMYD4Q8IYR2 804 aaPredicted RBP10.91□□□□□ -0.66
VPS4B-207ENST00000591519 CPXM2Q8N436 756 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 SPATA20Q8TB22 786 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 JAKMIP2Q96AA8 810 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 CCDC34Q96HJ3 373 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 MRGPRX1Q96LB2 322 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 GSDMAQ96QA5 445 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 CAPN10Q9HC96 672 aa10.91□□□□□ -0.66
VPS4B-207ENST00000591519 WASH3PC4AMC7 463 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 TIMM44O43615 452 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 PROS1P07225 676 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms