RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PAPOLBQ9NRJ5 636 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 PCDHA11Q9Y5I1 949 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 TYW5A2RUC4 315 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 INPP5AQ14642 412 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 CATSPERBQ9H7T0 1116 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 SLC38A7Q9NVC3 462 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 TPH1P17752 444 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 GDPD5Q8WTR4 605 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 UNKQ9C0B0 810 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 DOT1LQ8TEK3 1739 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 CCDC153Q494R4 210 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 C6orf89Q6UWU4 347 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 SPDYE1Q8NFV5 336 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 SIKE1Q9BRV8 207 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 TSPYL2Q9H2G4 693 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 DNAJC5Q9H3Z4 198 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 TCF7L2Q9NQB0 619 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 IL1RAPL1Q9NZN1 696 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 TNFSF13BQ9Y275 285 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 TUBGCP6Q96RT7 1819 aa17.61■□□□□ 0.41
SMARCA4-215ENST00000590574 E5RI56 91 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 PMM2O15305 246 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 JCHAINP01591 159 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 ATP4AP20648 1035 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 AKAP5P24588 427 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 GPR88Q9GZN0 384 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 EFCAB1Q9HAE3 211 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 C2orf71A6NGG8 1288 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 F8W8V4 182 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 KCNK1O00180 336 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 PLSCR1O15162 318 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 ANXA9O76027 345 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 ERVK-10P10266 1014 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 SOX11P35716 441 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 PLEKHO2Q8TD55 490 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 CALML6Q8TD86 181 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 COPS5Q92905 334 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 USP13Q92995 863 aaPredicted RBP17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 NKD2Q969F2 451 aaPredicted RBP17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 OSMRQ99650 979 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 CPNE1Q99829 537 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 SPON2Q9BUD6 331 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 MROH8Q9H579 483 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 RNF19AQ9NV58 838 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 LRFN2Q9ULH4 789 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 MYPNQ86TC9 1320 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 TOMM70O94826 608 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 PROCP04070 461 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 PCSK1P29120 753 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 MLH1P40692 756 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 TKTL1P51854 596 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 EEF1DP3Q658K8 133 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 CLNKQ7Z7G1 428 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 DEFB106AQ8N104 65 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 NUP93Q8N1F7 819 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 PYDC1Q8WXC3 89 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 RMDN1Q96DB5 314 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 CPXM1Q96SM3 734 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 H3BRB1 525 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 MPOP05164 745 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 STMN1P16949 149 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 FOXN2P32314 431 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 FAM83EQ2M2I3 478 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 SLC2A14Q8TDB8 520 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 TUT1Q9H6E5 874 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 CHST12Q9NRB3 414 aa17.6■□□□□ 0.41
SMARCA4-215ENST00000590574 DCXO43602 365 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 EEF1DP29692 281 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 UBAP2LQ14157 1087 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 CELF3Q5SZQ8 465 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 ZNF516Q92618 1163 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 LRCH4O75427 683 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 FAM155BO75949 473 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 RAG1P15918 1043 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 SPANXN3Q5MJ09 141 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 USP6NLQ92738 828 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 NRDE2Q9H7Z3 1164 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 SETD4Q9NVD3 440 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 A0A096LPK6 155 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 TFE3P19532 575 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 ACAT1P24752 427 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 SLC25A3Q00325 362 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 IFNEQ86WN2 208 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 PCYOX1LQ8NBM8 494 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 SLCO2A1Q92959 643 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 PPP2R3CQ969Q6 453 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 CYP4F12Q9HCS2 524 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 XPO1O14980 1071 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 USP12O75317 370 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 ATP5BP06576 529 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 CD48P09326 243 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 GRIK4Q16099 956 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 XYLT1Q86Y38 959 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 ERO1BQ86YB8 467 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 CATSPER2Q96P56 530 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 CCT7Q99832 543 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 XPNPEP1Q9NQW7 623 aa17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 AAR2Q9Y312 384 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-215ENST00000590574 SIPA1L3O60292 1781 aaPredicted RBP17.58■□□□□ 0.41
SMARCA4-215ENST00000590574 HACD1B0YJ81 288 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms