RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 MSI1O43347 362 aaKnown RBP12.55□□□□□ -0.4
APOC1-206ENST00000590334 RDXP35241 583 aaKnown RBP12.55□□□□□ -0.4
APOC1-206ENST00000590334 CXCR3P49682 368 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 HDAC4P56524 1084 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 TBX4P57082 545 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 ZP2Q05996 745 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 DEUP1Q05D60 604 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 KIF5AQ12840 1032 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 PIGHQ14442 188 aaPredicted RBP12.55□□□□□ -0.4
APOC1-206ENST00000590334 PPP2R5DQ14738 602 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 C15orf59Q2T9L4 293 aaPredicted RBP12.55□□□□□ -0.4
APOC1-206ENST00000590334 BRMS1LQ5PSV4 323 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 SH3PXD2AQ5TCZ1 1133 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 TANGO2Q6ICL3 276 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 PARM1Q6UWI2 310 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 HTR3DQ70Z44 454 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 MFSD6LQ8IWD5 586 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 RIN3Q8TB24 985 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 SH3RF2Q8TEC5 729 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 FAM172AQ8WUF8 416 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 FGF14Q92915 247 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 AZIN2Q96A70 460 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 FCRL2Q96LA5 508 aaPredicted RBP12.55□□□□□ -0.4
APOC1-206ENST00000590334 LRRC3BQ96PB8 259 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 NCAPGQ9BPX3 1015 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 FAM204AQ9H8W3 233 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 PIGVQ9NUD9 493 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.55□□□□□ -0.43e-11■■■□□ 18.3
APOC1-206ENST00000590334 DDIT4Q9NX09 232 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 SMPD4Q9NXE4 827 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 IP6K2Q9UHH9 426 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 SALL4Q9UJQ4 1053 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 DUSP10Q9Y6W6 482 aa12.55□□□□□ -0.4
APOC1-206ENST00000590334 COL4A3Q01955 1670 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 DOCK4Q8N1I0 1966 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 KIAA1549LQ6ZVL6 1849 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 A0A0U1RQJ8 604 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 HEPACAM2A8MVW5 462 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 KCNU1A8MYU2 1149 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 LATS1O95835 1130 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 KLKB1P03952 638 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 SLC2A3P11169 496 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 DESP17661 470 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 PSMA2P25787 234 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 CCR1P32246 355 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 MAN1A1P33908 653 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 VIPR2P41587 438 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 ATP11AP98196 1134 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 FCHO2Q0JRZ9 810 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 MTA1Q13330 715 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 NUGGCQ68CJ6 796 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 VITQ6UXI7 678 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 Q6ZNB5 142 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 UNC45BQ8IWX7 931 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 ARFGAP1Q8N6T3 406 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 BPIFB1Q8TDL5 484 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 DEPDC1BQ8WUY9 529 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 ATRIPQ8WXE1 791 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 WBP2Q969T9 261 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 RPGRIP1Q96KN7 1286 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 DCLK3Q9C098 648 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 ARHGEF38Q9NXL2 777 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 CFAP97Q9P2B7 532 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 IGSF9Q9P2J2 1179 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 STOML2Q9UJZ1 356 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 PPP2R2CQ9Y2T4 447 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 PAXBP1Q9Y5B6 917 aa12.54□□□□□ -0.4
APOC1-206ENST00000590334 TRIOO75962 3097 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 KRT86O43790 486 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 LRCH4O75427 683 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 RNF8O76064 485 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 PROSCO94903 275 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 SP100P23497 879 aaPredicted RBP12.53□□□□□ -0.4
APOC1-206ENST00000590334 PCK1P35558 622 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 HARS2P49590 506 aaKnown RBP12.53□□□□□ -0.4
APOC1-206ENST00000590334 ATXN1P54253 815 aaKnown RBP12.53□□□□□ -0.4
APOC1-206ENST00000590334 AIF1P55008 147 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 NME3Q13232 169 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 CDO1Q16878 200 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 RAB6CQ53S08 254 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 SND1Q7KZF4 910 aaKnown RBP eCLIP12.53□□□□□ -0.45e-25■■■■□ 21
APOC1-206ENST00000590334 FAM217AQ8IXS0 508 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 RNF10Q8N5U6 811 aaKnown RBP12.53□□□□□ -0.4
APOC1-206ENST00000590334 OTUB2Q96DC9 234 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 BTBD6Q96KE9 485 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 BTN2A3PQ96KV6 586 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 PLA2G2FQ9BZM2 168 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 RAB6CQ9H0N0 254 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 WDCPQ9H6R7 721 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 LSM7Q9UK45 103 aaKnown RBP12.53□□□□□ -0.4
APOC1-206ENST00000590334 AGO1Q9UL18 857 aaKnown RBP12.53□□□□□ -0.4
APOC1-206ENST00000590334 ZNF510Q9Y2H8 683 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 SH3BP1Q9Y3L3 701 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.53□□□□□ -0.44e-6■□□□□ 11
APOC1-206ENST00000590334 NUMBLQ9Y6R0 609 aa12.53□□□□□ -0.4
APOC1-206ENST00000590334 MIA3Q5JRA6 1907 aa12.52□□□□□ -0.4
APOC1-206ENST00000590334 MYO10Q9HD67 2058 aa12.52□□□□□ -0.4
APOC1-206ENST00000590334 SYNJ2BP-COX16A0A087WUM0 186 aa12.52□□□□□ -0.41
APOC1-206ENST00000590334 APOEP02649 317 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms