RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 TRIM62Q9BVG3 475 aa20.4■□□□□ 0.86
TPM4-208ENST00000588410 ACP6Q9NPH0 428 aa20.4■□□□□ 0.86
TPM4-208ENST00000588410 SEMA4GQ9NTN9 838 aa20.4■□□□□ 0.86
TPM4-208ENST00000588410 FBXO10Q9UK96 956 aa20.4■□□□□ 0.86
TPM4-208ENST00000588410 BECN2A8MW95 431 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 PRRT4C9JH25 899 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 CAPN9O14815 690 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 FOXD2O60548 495 aaPredicted RBP20.39■□□□□ 0.85
TPM4-208ENST00000588410 TSPAN3O60637 253 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 LATS1O95835 1130 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 HOXB2P14652 356 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 HNRNPLP14866 589 aaKnown RBP eCLIP20.39■□□□□ 0.85
TPM4-208ENST00000588410 SDHBP21912 280 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 TGM1P22735 817 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 EEF1GP26641 437 aaKnown RBP20.39■□□□□ 0.85
TPM4-208ENST00000588410 RPL34P49207 117 aaKnown RBP20.39■□□□□ 0.85
TPM4-208ENST00000588410 ZNF445P59923 1031 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 CSRP2Q16527 193 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 NUGGCQ68CJ6 796 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 UNC45BQ8IWX7 931 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 SPACA7Q96KW9 195 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 SLC4A5Q9BY07 1137 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 ARRDC1-AS1Q9H2J1 176 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 SAMSN1Q9NSI8 373 aaKnown RBP20.39■□□□□ 0.85
TPM4-208ENST00000588410 SLC27A6Q9Y2P4 619 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 EP300Q09472 2414 aaPredicted RBP20.39■□□□□ 0.85
TPM4-208ENST00000588410 GVINP1Q7Z2Y8 2422 aa20.39■□□□□ 0.85
TPM4-208ENST00000588410 EPN2O95208 641 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 TPM2P07951 284 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 SLC11A2P49281 568 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 TBX4P57082 545 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 BYSLQ13895 437 aaKnown RBP20.38■□□□□ 0.85
TPM4-208ENST00000588410 RSPO4Q2I0M5 234 aaPredicted RBP20.38■□□□□ 0.85
TPM4-208ENST00000588410 MIIPQ5JXC2 388 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 ADGRF1Q5T601 910 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 SASS6Q6UVJ0 657 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 FAM217AQ8IXS0 508 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 ENOX1Q8TC92 643 aaKnown RBP20.38■□□□□ 0.85
TPM4-208ENST00000588410 UCMAQ8WVF2 138 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 TMA16Q96EY4 203 aaKnown RBP20.38■□□□□ 0.85
TPM4-208ENST00000588410 SERPINB11Q96P15 392 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 NOX5Q96PH1 765 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 SLC2A11Q9BYW1 496 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 SIX2Q9NPC8 291 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 NFE2L3Q9Y4A8 694 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 MYO16Q9Y6X6 1858 aa20.38■□□□□ 0.85
TPM4-208ENST00000588410 E5RJQ4 531 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 MAP3K13O43283 966 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 KRT9P35527 623 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 PDCLQ13371 301 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 RAPGEF1Q13905 1077 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 PUM1Q14671 1186 aaKnown RBP eCLIP20.37■□□□□ 0.852e-10■■□□□ 13.3
TPM4-208ENST00000588410 E2F5Q15329 346 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 TCP11X2Q5H9J9 407 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 ANKS1BQ7Z6G8 1248 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 TMEM110Q86TL2 294 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 P2RY11Q96G91 374 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 ACOX2Q99424 681 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 DUSP15Q9H1R2 295 aaPredicted RBP20.37■□□□□ 0.85
TPM4-208ENST00000588410 STOML2Q9UJZ1 356 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 CDV3Q9UKY7 258 aaKnown RBP20.37■□□□□ 0.85
TPM4-208ENST00000588410 HCN2Q9UL51 889 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 NAALADL1Q9UQQ1 740 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 PCDHGA5Q9Y5G8 931 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.37■□□□□ 0.85
TPM4-208ENST00000588410 MYH10P35580 1976 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 OTOGLQ3ZCN5 2332 aa20.37■□□□□ 0.85
TPM4-208ENST00000588410 FOXN3O00409 490 aaPredicted RBP20.36■□□□□ 0.85
TPM4-208ENST00000588410 GFRA2O00451 464 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 BPIFB4P59827 614 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 ARID5AQ03989 594 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 RING1Q06587 406 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 PRR23CQ6ZRP0 262 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 PASD1Q8IV76 773 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 C12orf50Q8NA57 414 aaPredicted RBP20.36■□□□□ 0.85
TPM4-208ENST00000588410 DQX1Q8TE96 717 aaKnown RBP20.36■□□□□ 0.85
TPM4-208ENST00000588410 DDX50Q9BQ39 737 aaKnown RBP20.36■□□□□ 0.85
TPM4-208ENST00000588410 PDCL3Q9H2J4 239 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 CACNA2D2Q9NY47 1150 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 TAB2Q9NYJ8 693 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 CYTH4Q9UIA0 394 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 AJAP1Q9UKB5 411 aaPredicted RBP20.36■□□□□ 0.85
TPM4-208ENST00000588410 PCDHGC3Q9UN70 934 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 CEP83Q9Y592 693 aa20.36■□□□□ 0.85
TPM4-208ENST00000588410 NPC1O15118 1278 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 PAPSS1O43252 624 aaPredicted RBP20.35■□□□□ 0.85
TPM4-208ENST00000588410 MBD3O95983 291 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 IGLV3-27P01718 113 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 FYNP06241 537 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 SNX16P57768 344 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 YWHAZP63104 245 aaKnown RBP20.35■□□□□ 0.85
TPM4-208ENST00000588410 STARD3Q14849 445 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 CCDC6Q16204 474 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 GEN1Q17RS7 908 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 RBM43Q6ZSC3 357 aaKnown RBP20.35■□□□□ 0.85
TPM4-208ENST00000588410 BEND5Q7L4P6 421 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 OLIG1Q8TAK6 271 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 IPO4Q8TEX9 1081 aaKnown RBP20.35■□□□□ 0.85
TPM4-208ENST00000588410 RLN3Q8WXF3 142 aa20.35■□□□□ 0.85
TPM4-208ENST00000588410 PIWIL1Q96J94 861 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms