RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 RAB6CQ53S08 254 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 GPR158Q5T848 1215 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 SH3PXD2AQ5TCZ1 1133 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 KATNAL2Q8IYT4 538 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 MAB21L3Q8N8X9 362 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 FAM172AQ8WUF8 416 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 SLC22A12Q96S37 553 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 RAB6CQ9H0N0 254 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 S1PR5Q9H228 398 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 SLITRK6Q9H5Y7 841 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 CALCOCO1Q9P1Z2 691 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 USP18Q9UMW8 372 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 M0QYT0 321 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 KCNK3O14649 394 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 ZNF197O14709 1029 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 TRUB2O95900 331 aaKnown RBP15.53■□□□□ 0.08
NFIX-208ENST00000587260 F9P00740 461 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 IGLV3-25P01717 112 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 KRT7P08729 469 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 TCF4P15884 667 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 FSHRP23945 695 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 MARCKSL1P49006 195 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 TUBP50607 506 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 ATXN1P54253 815 aaKnown RBP15.53■□□□□ 0.08
NFIX-208ENST00000587260 BOLA3Q53S33 107 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 MSANTD2Q6P1R3 559 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 TADA2BQ86TJ2 420 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 CREG2Q8IUH2 290 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 ARL14EPQ8N8R7 260 aaPredicted RBP15.53■□□□□ 0.08
NFIX-208ENST00000587260 COG1Q8WTW3 980 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 CYP2S1Q96SQ9 504 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 SMOC2Q9H3U7 446 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 UBE2ZQ9H832 354 aaPredicted RBP15.53■□□□□ 0.08
NFIX-208ENST00000587260 OLA1Q9NTK5 396 aaKnown RBP15.53■□□□□ 0.08
NFIX-208ENST00000587260 DDIT4Q9NX09 232 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 CD207Q9UJ71 328 aa15.53■□□□□ 0.08
NFIX-208ENST00000587260 TTC7AQ9ULT0 858 aaPredicted RBP15.53■□□□□ 0.08
NFIX-208ENST00000587260 BRWD1Q9NSI6 2320 aa15.52■□□□□ 0.08
NFIX-208ENST00000587260 C5orf42Q9H799 3197 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 SRGAP2O75044 1071 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 CKMP06732 381 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 HMBSP08397 361 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 MBL2P11226 248 aaPredicted RBP15.52■□□□□ 0.07
NFIX-208ENST00000587260 IL1R2P27930 398 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 ATP5C1P36542 298 aaKnown RBP15.52■□□□□ 0.07
NFIX-208ENST00000587260 WHAMMP3Q1A5X7 153 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 ATAT1Q5SQI0 421 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 DCAF12L1Q5VU92 463 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 CYP4V2Q6ZWL3 525 aaPredicted RBP15.52■□□□□ 0.07
NFIX-208ENST00000587260 RASGEF1CQ8N431 466 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 SMRP1Q8NCR6 262 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 TTC16Q8NEE8 873 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 EXD1Q8NHP7 514 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 TEKT4Q8WW24 435 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 RIPOR3Q96MK2 946 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 CDK5RAP1Q96SZ6 601 aaKnown RBP15.52■□□□□ 0.07
NFIX-208ENST00000587260 RNF38Q9H0F5 515 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 SMG9Q9H0W8 520 aaKnown RBP15.52■□□□□ 0.07
NFIX-208ENST00000587260 WDR6Q9NNW5 1121 aaKnown RBP15.52■□□□□ 0.07
NFIX-208ENST00000587260 SMPD4Q9NXE4 827 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 DDX56Q9NY93 547 aaKnown RBP15.52■□□□□ 0.07
NFIX-208ENST00000587260 MARCH2Q9P0N8 246 aa15.52■□□□□ 0.07
NFIX-208ENST00000587260 SPTBN5Q9NRC6 3674 aaKnown RBP15.51■□□□□ 0.07
NFIX-208ENST00000587260 TRAV19A0A0A6YYK7 116 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 SLC12A8A0AV02 714 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 IRAK2O43187 625 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 PRPSAP2O60256 369 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 CXCR5P32302 372 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 RDXP35241 583 aaKnown RBP15.51■□□□□ 0.07
NFIX-208ENST00000587260 SSR1P43307 286 aaKnown RBP15.51■□□□□ 0.07
NFIX-208ENST00000587260 AIF1P55008 147 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 DEUP1Q05D60 604 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 CBX2Q14781 532 aaPredicted RBP15.51■□□□□ 0.07
NFIX-208ENST00000587260 PSTKQ8IV42 348 aaKnown RBP15.51■□□□□ 0.07
NFIX-208ENST00000587260 ACTRT1Q8TDG2 376 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 SERPINB11Q96P15 392 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 SLC46A2Q9BY10 475 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 POMKQ9H5K3 350 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 PIGVQ9NUD9 493 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 DNMT3LQ9UJW3 386 aa15.51■□□□□ 0.07
NFIX-208ENST00000587260 USP15Q9Y4E8 981 aaPredicted RBP15.51■□□□□ 0.07
NFIX-208ENST00000587260 ZNF185O15231 689 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 ZRANB2O95218 330 aaKnown RBP eCLIP15.5■□□□□ 0.07
NFIX-208ENST00000587260 OLFM2O95897 454 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 IRF1P10914 325 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 PYGMP11217 842 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 HDCP19113 662 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 DDX6P26196 483 aaKnown RBP eCLIP15.5■□□□□ 0.07
NFIX-208ENST00000587260 GBP1P32455 592 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 GJC1P36383 396 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 CXCR3P49682 368 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 DNA2P51530 1060 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 NNTQ13423 1086 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 TXNRD3NBQ6F5E7 133 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 KLHDC10Q6PID8 442 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 POTEHQ6S545 545 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 FAM131BQ86XD5 332 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 NPAS3Q8IXF0 933 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 RCOR2Q8IZ40 523 aa15.5■□□□□ 0.07
NFIX-208ENST00000587260 ZSWIM3Q96MP5 696 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms