RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 USP46P62068 366 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 PSMC1P62191 440 aaKnown RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 YWHAEP62258 255 aaKnown RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 TFAMQ00059 246 aaKnown RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 USP4Q13107 963 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 BIRC3Q13489 604 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 DRAP1Q14919 205 aaPredicted RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 ELF2Q15723 593 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 WHAMMP3Q1A5X7 153 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 GAB4Q2WGN9 574 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 EML3Q32P44 896 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 ZACNQ401N2 412 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 EMC10Q5UCC4 262 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 DPY19L2P1Q6NXN4 242 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 SV2AQ7L0J3 742 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 SYT13Q7L8C5 426 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 IRF2BP2Q7Z5L9 587 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 PACS2Q86VP3 889 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 ZNF677Q86XU0 584 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 CD302Q8IX05 232 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 TMEFF1Q8IYR6 380 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 DCP1BQ8IZD4 617 aaKnown RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 SYCE1Q8N0S2 351 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 PPM1KQ8N3J5 372 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 CPA6Q8N4T0 437 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 MDGA1Q8NFP4 955 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 TSTD1Q8NFU3 115 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 OR2I1PQ8NGU4 316 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 LMO3Q8TAP4 145 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 OSCP1Q8WVF1 389 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 PIGKQ92643 395 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 TAF4BQ92750 862 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 TSPAN18Q96SJ8 248 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 PKMYT1Q99640 499 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 SCNM1Q9BWG6 230 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 UBE2TQ9NPD8 197 aaPredicted RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 TMEM74BQ9NUR3 256 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 DDX43Q9NXZ2 648 aaKnown RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 HSFX1Q9UBD0 423 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 CDC23Q9UJX2 597 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 AGAP1Q9UPQ3 857 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 REXO2Q9Y3B8 237 aaKnown RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 JRKLQ9Y4A0 524 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 PCDHGA5Q9Y5G8 931 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.24□□□□□ -1.09
VMP1-204ENST00000587259 MRFAP1Q9Y605 127 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 WDFY3Q8IZQ1 3526 aa8.24□□□□□ -1.09
VMP1-204ENST00000587259 DENND4CQ5VZ89 1909 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 CCDC163A0A0D9SF12 145 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 SPAARA0A1B0GVQ0 90 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 HYAL3O43820 417 aaPredicted RBP8.23□□□□□ -1.09
VMP1-204ENST00000587259 FOXD2O60548 495 aaPredicted RBP8.23□□□□□ -1.09
VMP1-204ENST00000587259 RHOBTB1O94844 696 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 TNNC2P02585 160 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 TUBBP07437 444 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 PLEKP08567 350 aaPredicted RBP8.23□□□□□ -1.09
VMP1-204ENST00000587259 KRT19P08727 400 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 H2AFZP0C0S5 128 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 CSH1P0DML2 217 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 CSH2P0DML3 217 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 PRLRP16471 622 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 TCP1P17987 556 aaKnown RBP8.23□□□□□ -1.09
VMP1-204ENST00000587259 DRD1P21728 446 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 LMO2P25791 158 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 PTGER3P43115 390 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 IFNAR2P48551 515 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 DLG4P78352 724 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 ARID5AQ03989 594 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 PTK2Q05397 1052 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 GFPT1Q06210 699 aaPredicted RBP8.23□□□□□ -1.09
VMP1-204ENST00000587259 PDGFRLQ15198 375 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 DUOXA2Q1HG44 320 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 SV2CQ496J9 727 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 INTS6LQ5JSJ4 861 aaKnown RBP8.23□□□□□ -1.09
VMP1-204ENST00000587259 C1orf220Q5T0J3 134 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 PMS2CLQ68D20 193 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 ALKBH5Q6P6C2 394 aaKnown RBP8.23□□□□□ -1.09
VMP1-204ENST00000587259 TRIM72Q6ZMU5 477 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 H2AFVQ71UI9 128 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 CYP2U1Q7Z449 544 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 C12orf40Q86WS4 652 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 SLC35F6Q8N357 371 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 CAMKK1Q8N5S9 505 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 ALLCQ8N6M5 410 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 CXorf38Q8TB03 319 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 USP33Q8TEY7 942 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 SHC3Q92529 594 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 ANKRD36BP1Q96IX9 119 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 WDR24Q96S15 920 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 SMPD4Q9NXE4 827 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 RNF14Q9UBS8 474 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 ADAMTS1Q9UHI8 967 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 MBD1Q9UIS9 605 aaPredicted RBP8.23□□□□□ -1.09
VMP1-204ENST00000587259 SIX4Q9UIU6 781 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 NAGPAQ9UK23 515 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 DSEQ9UL01 958 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 DERAQ9Y315 318 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 C2CD2Q9Y426 696 aa8.23□□□□□ -1.09
VMP1-204ENST00000587259 SNX9Q9Y5X1 595 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms