RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 MAGEA11P43364 429 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 ALDH7A1P49419 539 aaKnown RBP10.58□□□□□ -0.72
APOC1-201ENST00000586638 DEUP1Q05D60 604 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 NME3Q13232 169 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 ADAM15Q13444 863 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 HLTFQ14527 1009 aaKnown RBP eCLIP10.58□□□□□ -0.72
APOC1-201ENST00000586638 DDR2Q16832 855 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 MGAT5BQ3V5L5 792 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 NPNTQ6UXI9 565 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 RNF19BQ6ZMZ0 732 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 BBS12Q6ZW61 710 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 ANKS3Q6ZW76 656 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 BNIPLQ7Z465 357 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 MAATS1Q7Z4T9 603 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 TAC4Q86UU9 113 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 RNF135Q8IUD6 432 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 SCML4Q8N228 414 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 CMASQ8NFW8 434 aaPredicted RBP10.58□□□□□ -0.72
APOC1-201ENST00000586638 AENQ8WTP8 325 aaKnown RBP10.58□□□□□ -0.72
APOC1-201ENST00000586638 IRGQQ8WZA9 623 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 EDAQ92838 391 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 CLP1Q92989 425 aaKnown RBP10.58□□□□□ -0.72
APOC1-201ENST00000586638 C8orf48Q96LL4 319 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 GDAP1L1Q96MZ0 367 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 SEPT5Q99719 369 aaPredicted RBP10.58□□□□□ -0.72
APOC1-201ENST00000586638 MAGEB5Q9BZ81 275 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 RAB17Q9H0T7 212 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 DHX35Q9H5Z1 703 aaKnown RBP10.58□□□□□ -0.72
APOC1-201ENST00000586638 ALG13Q9NP73 1137 aaKnown RBP10.58□□□□□ -0.72
APOC1-201ENST00000586638 TMPRSS4Q9NRS4 437 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 PIGVQ9NUD9 493 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 MTRRQ9UBK8 725 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 MUTYHQ9UIF7 546 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 CD207Q9UJ71 328 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 UTP11Q9Y3A2 253 aaKnown RBP10.58□□□□□ -0.72
APOC1-201ENST00000586638 CDY1Q9Y6F8 540 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 USP3Q9Y6I4 520 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 ZDBF2Q9HCK1 2354 aa10.58□□□□□ -0.72
APOC1-201ENST00000586638 A0A1W2PQH9 124 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 WDR27A2RRH5 827 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 LINC01565O15544 149 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 LIASO43766 372 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 SASH3O75995 380 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 ENDOD1O94919 500 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 HAPLN1P10915 354 aaPredicted RBP10.57□□□□□ -0.72
APOC1-201ENST00000586638 PECAM1P16284 738 aaPredicted RBP10.57□□□□□ -0.72
APOC1-201ENST00000586638 ECHS1P30084 290 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 PGFP49763 221 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 YWHAGP61981 247 aaKnown RBP eCLIP10.57□□□□□ -0.72
APOC1-201ENST00000586638 USP46P62068 366 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 OTUD4Q01804 1114 aaKnown RBP10.57□□□□□ -0.72
APOC1-201ENST00000586638 ROR1Q01973 937 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 SMAD4Q13485 552 aaKnown RBP10.57□□□□□ -0.72
APOC1-201ENST00000586638 PTK6Q13882 451 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 PDK2Q15119 407 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 PPP1R7Q15435 360 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 USP41Q3LFD5 358 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 BOLA3Q53S33 107 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 PPP6R3Q5H9R7 873 aaPredicted RBP10.57□□□□□ -0.72
APOC1-201ENST00000586638 ERMARDQ5T6L9 678 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 DUPD1Q68J44 220 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 PM20D1Q6GTS8 502 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 VSTM1Q6UX27 236 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 SND1Q7KZF4 910 aaKnown RBP eCLIP10.57□□□□□ -0.725e-25■■■■□ 21
APOC1-201ENST00000586638 PYROXD2Q8N2H3 581 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 ACTL9Q8TC94 416 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 SPPL2BQ8TCT7 592 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 GPR152Q8TDT2 470 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 DQX1Q8TE96 717 aaKnown RBP10.57□□□□□ -0.72
APOC1-201ENST00000586638 HNRNPLLQ8WVV9 542 aaKnown RBP10.57□□□□□ -0.72
APOC1-201ENST00000586638 PIK3R5Q8WYR1 880 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 PPP2R3CQ969Q6 453 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 NT5C3BQ969T7 300 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 TMEM169Q96HH4 297 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 NCAPGQ9BPX3 1015 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 NMUR1Q9HB89 426 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 GMIPQ9P107 970 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 DNPEPQ9ULA0 475 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 FZD10Q9ULW2 581 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 SLC27A5Q9Y2P5 690 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 SNX24Q9Y343 169 aa10.57□□□□□ -0.72
APOC1-201ENST00000586638 WDFY4Q6ZS81 3184 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 OBSL1O75147 1896 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 CSPG5O95196 566 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 SOD2P04179 222 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 FAM153BP0C7A2 387 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 LINC00271P0C7V0 271 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 L1CAMP32004 1257 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 RPL21P46778 160 aaKnown RBP10.56□□□□□ -0.72
APOC1-201ENST00000586638 GLUD2P49448 558 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 VPS41P49754 854 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 VCPP55072 806 aaKnown RBP10.56□□□□□ -0.72
APOC1-201ENST00000586638 GPR17Q13304 367 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 MTMR3Q13615 1198 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 CUL1Q13616 776 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 TRIP13Q15645 432 aaPredicted RBP10.56□□□□□ -0.72
APOC1-201ENST00000586638 DPYSL2Q16555 572 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 CCNG2Q16589 344 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 FAM153CQ494X1 144 aa10.56□□□□□ -0.72
APOC1-201ENST00000586638 ANKRD20A8PQ5CZ79 823 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms