RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 LRIG1Q96JA1 1093 aa15.8■□□□□ 0.12
SF3A2-202ENST00000586396 NIF3L1Q9GZT8 377 aa15.8■□□□□ 0.12
SF3A2-202ENST00000586396 MIR1-1HGQ9H1L0 117 aa15.8■□□□□ 0.12
SF3A2-202ENST00000586396 KRT82Q9NSB4 513 aa15.8■□□□□ 0.12
SF3A2-202ENST00000586396 LSM7Q9UK45 103 aaKnown RBP15.8■□□□□ 0.12
SF3A2-202ENST00000586396 TMEM131Q92545 1883 aa15.8■□□□□ 0.12
SF3A2-202ENST00000586396 GFRA2O00451 464 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 CBFA2T3O75081 653 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 CILPO75339 1184 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 AP1G2O75843 785 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 SMC2O95347 1197 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 NCAM1P13591 858 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 KRT13P13646 458 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 PRCPP42785 496 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 CDH8P55286 799 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 FKBP3Q00688 224 aaKnown RBP15.79■□□□□ 0.12
SF3A2-202ENST00000586396 SCARA5Q6ZMJ2 495 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 HTR3DQ70Z44 454 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 SLCO6A1Q86UG4 719 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 ZMIZ2Q8NF64 920 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 BHMTQ93088 406 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 IMPG2Q9BZV3 1241 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 GAREM1Q9H706 876 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 APOBEC3GQ9HC16 384 aaKnown RBP15.79■□□□□ 0.12
SF3A2-202ENST00000586396 SCUBE2Q9NQ36 999 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.79■□□□□ 0.122e-8■■■■■ 51.3
SF3A2-202ENST00000586396 TLR8Q9NR97 1041 aaKnown RBP15.79■□□□□ 0.12
SF3A2-202ENST00000586396 MARK1Q9P0L2 795 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 WDR35Q9P2L0 1181 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 HOOK1Q9UJC3 728 aaKnown RBP15.79■□□□□ 0.12
SF3A2-202ENST00000586396 NFE2L3Q9Y4A8 694 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 PCDHA5Q9Y5H7 936 aa15.79■□□□□ 0.12
SF3A2-202ENST00000586396 CKAP5Q14008 2032 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 TP53BP1Q12888 1972 aaPredicted RBP15.78■□□□□ 0.12
SF3A2-202ENST00000586396 GOLGA4Q13439 2230 aaKnown RBP15.78■□□□□ 0.12
SF3A2-202ENST00000586396 WASH3PC4AMC7 463 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 CETN3O15182 167 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 STX10O60499 249 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 PIK3CAP42336 1068 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 MATKP42679 507 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 NDST1P52848 882 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 ZNF276Q8N554 614 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 DNASE2BQ8WZ79 361 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 BBC3Q96PG8 261 aaPredicted RBP15.78■□□□□ 0.12
SF3A2-202ENST00000586396 HNRNPABQ99729 332 aaKnown RBP15.78■□□□□ 0.12
SF3A2-202ENST00000586396 GPR174Q9BXC1 333 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 PRDM16Q9HAZ2 1276 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 IL21RQ9HBE5 538 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 TM7SF3Q9NS93 570 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 MAPK8IP1Q9UQF2 711 aa15.78■□□□□ 0.12
SF3A2-202ENST00000586396 URB1O60287 2271 aaKnown RBP15.77■□□□□ 0.12
SF3A2-202ENST00000586396 GOLGA6L4A6NEF3 574 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 GREM1O60565 184 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 ZNF883P0CG24 379 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 TRIM49P0CI25 452 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 TRIM49CP0CI26 452 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 GCLMP48507 274 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 MXI1P50539 228 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 FUT11Q495W5 492 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 DCAF12L1Q5VU92 463 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 IL27RAQ6UWB1 636 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 SMYD4Q8IYR2 804 aaPredicted RBP15.77■□□□□ 0.12
SF3A2-202ENST00000586396 FBXL13Q8NEE6 735 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 CADM4Q8NFZ8 388 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 SMOQ99835 787 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 FBXO44Q9H4M3 255 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 WSB2Q9NYS7 404 aaPredicted RBP15.77■□□□□ 0.12
SF3A2-202ENST00000586396 KIAA1522Q9P206 1035 aaPredicted RBP15.77■□□□□ 0.12
SF3A2-202ENST00000586396 USP36Q9P275 1121 aaKnown RBP15.77■□□□□ 0.12
SF3A2-202ENST00000586396 HMGXB4Q9UGU5 601 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 FNDC3AQ9Y2H6 1198 aaKnown RBP15.77■□□□□ 0.12
SF3A2-202ENST00000586396 STON1Q9Y6Q2 735 aa15.77■□□□□ 0.12
SF3A2-202ENST00000586396 GOLGA8CPA6NN73 597 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 HHLA1C9JL84 531 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 BCAT2O15382 392 aaPredicted RBP15.76■□□□□ 0.11
SF3A2-202ENST00000586396 FLRT2O43155 660 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 TBX18O95935 607 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 EPB41P11171 864 aaKnown RBP15.76■□□□□ 0.11
SF3A2-202ENST00000586396 ATP5C1P36542 298 aaKnown RBP15.76■□□□□ 0.11
SF3A2-202ENST00000586396 PGFP49763 221 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 SPOPLQ6IQ16 392 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 TMPRSS7Q7RTY8 843 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 METTL3Q86U44 580 aaKnown RBP15.76■□□□□ 0.11
SF3A2-202ENST00000586396 CACUL1Q86Y37 369 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 BAHD1Q8TBE0 780 aaPredicted RBP15.76■□□□□ 0.11
SF3A2-202ENST00000586396 SMARCE1Q969G3 411 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 DHTKD1Q96HY7 919 aaPredicted RBP15.76■□□□□ 0.11
SF3A2-202ENST00000586396 TWNKQ96RR1 684 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 CDC6Q99741 560 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 NT5C1AQ9BXI3 368 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 KLF16Q9BXK1 252 aaPredicted RBP15.76■□□□□ 0.11
SF3A2-202ENST00000586396 MKRN2Q9H000 416 aaKnown RBP15.76■□□□□ 0.11
SF3A2-202ENST00000586396 CYLDQ9NQC7 956 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 PLK2Q9NYY3 685 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 DKK4Q9UBT3 224 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 CFAP46Q8IYW2 2715 aa15.76■□□□□ 0.11
SF3A2-202ENST00000586396 TENM4Q6N022 2769 aa15.75■□□□□ 0.11
SF3A2-202ENST00000586396 KCNJ18B7U540 433 aa15.75■□□□□ 0.11
SF3A2-202ENST00000586396 CCDC130P13994 396 aa15.75■□□□□ 0.11
SF3A2-202ENST00000586396 TRIM21P19474 475 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms