RNA–Protein interactions for RNA: ENST00000585685.5

APOC4-APOC2-201, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

TSL 5

Gene APOC4-APOC2, Length 1,829 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-201ENST00000585685 FAM149B1Q96BN6 582 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SLC2A13Q96QE2 648 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 APBA2Q99767 749 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 EBNA1BP2Q99848 306 aaKnown RBP17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 XAB2Q9HCS7 855 aaKnown RBP17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ARHGEF4Q9NR80 690 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SLC38A7Q9NVC3 462 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 STAP1Q9ULZ2 295 aa17.06■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 VAV1P15498 845 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 FDFT1P37268 417 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SETDB1Q15047 1291 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 DCAF6Q58WW2 860 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 LGSNQ5TDP6 509 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 WSCD1Q658N2 575 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 C17orf99Q6UX52 265 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 UNC5AQ6ZN44 842 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TBC1D1Q86TI0 1168 aaPredicted RBP17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 PPM1NQ8N819 430 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 GSDMBQ8TAX9 411 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MAGEC3Q8TD91 643 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 NDRG1Q92597 394 aaKnown RBP17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ZFP42Q96MM3 310 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TSPYL2Q9H2G4 693 aaPredicted RBP17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MANSC1Q9H8J5 431 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 LRRC4Q9HBW1 653 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ARHGEF3Q9NR81 526 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 A0A0A0MRY4 1105 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MANSC4A6NHS7 340 aaPredicted RBP17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CXorf49A8MYA2 514 aaPredicted RBP17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CLDN5O00501 218 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CHUKO15111 745 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 DCTN3O75935 186 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 KRT37O76014 449 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SNRPAP09012 282 aaKnown RBP17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ACAT1P24752 427 aaKnown RBP17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ALDH3A1P30838 453 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MNAT1P51948 309 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MRPS6P82932 125 aaKnown RBP17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CDK16Q00536 496 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 RIPK1Q13546 671 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SPDYAQ5MJ70 313 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ANKRD20A2Q5SQ80 823 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ANKRD20A1Q5TYW2 823 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ANKRD20A3Q5VUR7 823 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CST9Q5W186 159 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CTAGE3PQ8IX95 158 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 GSTCDQ8NEC7 633 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SOCS4Q8WXH5 440 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 KLHL29Q96CT2 875 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SPATA13Q96N96 652 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MYLK2Q9H1R3 596 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CHKBQ9Y259 395 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MFHAS1Q9Y4C4 1052 aa17.05■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 H3BRJ5 948 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MFSD11O43934 449 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 UNC5CO95185 931 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 PYGBP11216 843 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MLNP12872 115 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 AKR1A1P14550 325 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 GLUD2P49448 558 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 AIF1P55008 147 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 KCNJ2P63252 427 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 PITX1P78337 314 aaPredicted RBP17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SARNPP82979 210 aaKnown RBP17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 PRKD1Q15139 912 aaPredicted RBP17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MDH1BQ5I0G3 518 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 KIAA0319Q5VV43 1072 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 FYB2Q5VWT5 728 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CYS1Q717R9 158 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 RASAL3Q86YV0 1011 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SIX6OS1Q8N1H7 587 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TMEM86AQ8N2M4 240 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 RNF139Q8WU17 664 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 WNT8BQ93098 351 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 LRRC37BQ96QE4 947 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SLC9A7Q96T83 725 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 EIF2B3Q9NR50 452 aaKnown RBP17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SMYD2Q9NRG4 433 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MKS1Q9NXB0 559 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 DDX43Q9NXZ2 648 aaKnown RBP17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 PCDHA11Q9Y5I1 949 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TRPV2Q9Y5S1 764 aa17.04■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 FAM159BA6NKW6 160 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TRIM49D1C9J1S8 452 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 M0QYT0 321 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 M0QZ92 97 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 C2CD2LO14523 706 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 KPNA6O60684 536 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 ATP5HO75947 161 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 FBXO21O94952 628 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 FAM200BP0CF97 657 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 NDUFV1P49821 464 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 HUNKP57058 714 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SWT1Q5T5J6 900 aaKnown RBP17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MTBPQ96DY7 904 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 SENP8Q96LD8 212 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 MED10Q9BTT4 135 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 C12orf65Q9H3J6 166 aaKnown RBP17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 CRTAC1Q9NQ79 661 aa17.03■□□□□ 0.32
APOC4-APOC2-201ENST00000585685 TXLNGQ9NUQ3 528 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms