RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 MAPK8IP1Q9UQF2 711 aa15.74■□□□□ 0.11
VAPA-209ENST00000585042 ATXN2Q99700 1313 aaKnown RBP15.73■□□□□ 0.11
VAPA-209ENST00000585042 FAM221BA6H8Z2 402 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 WASH3PC4AMC7 463 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 CETN3O15182 167 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 ZNF202O95125 648 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 CD6P30203 668 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 CORO1AP31146 461 aaKnown RBP15.73■□□□□ 0.11
VAPA-209ENST00000585042 ZNF445P59923 1031 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 PDE4CQ08493 712 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 EFEMP1Q12805 493 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 ZNF394Q53GI3 561 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 PIGZQ86VD9 579 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 MINDY1Q8N5J2 469 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 DEFB119Q8N690 84 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 DNASE2BQ8WZ79 361 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 SEMA4DQ92854 862 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 GATA6Q92908 595 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 PLD4Q96BZ4 506 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 GTPBP2Q9BX10 602 aaKnown RBP15.73■□□□□ 0.11
VAPA-209ENST00000585042 GTPBP4Q9BZE4 634 aaKnown RBP15.73■□□□□ 0.11
VAPA-209ENST00000585042 PRDM16Q9HAZ2 1276 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 ELOVL2Q9NXB9 296 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 WSB2Q9NYS7 404 aaPredicted RBP15.73■□□□□ 0.11
VAPA-209ENST00000585042 PLK2Q9NYY3 685 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 MARCH2Q9P0N8 246 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 USP36Q9P275 1121 aaKnown RBP15.73■□□□□ 0.11
VAPA-209ENST00000585042 RASAL2Q9UJF2 1139 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 KIAA1257Q9ULG3 409 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 COQ4Q9Y3A0 265 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 MSRB2Q9Y3D2 182 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 FRYQ5TBA9 3013 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 CFAP47Q6ZTR5 3102 aa15.73■□□□□ 0.11
VAPA-209ENST00000585042 SYNCRIPO60506 623 aaKnown RBP15.72■□□□□ 0.11
VAPA-209ENST00000585042 ZBED1O96006 694 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 IGLV3-19P01714 112 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 C7P10643 843 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 EPB41P11171 864 aaKnown RBP15.72■□□□□ 0.11
VAPA-209ENST00000585042 CD59P13987 128 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 MXI1P50539 228 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 YWHAGP61981 247 aaKnown RBP eCLIP15.72■□□□□ 0.11
VAPA-209ENST00000585042 SIM1P81133 766 aaPredicted RBP15.72■□□□□ 0.11
VAPA-209ENST00000585042 TRIP4Q15650 581 aaPredicted RBP15.72■□□□□ 0.11
VAPA-209ENST00000585042 ZNF423Q2M1K9 1284 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 FUT11Q495W5 492 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 COBLL1Q53SF7 1204 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 RSRC2Q7L4I2 434 aaKnown RBP15.72■□□□□ 0.11
VAPA-209ENST00000585042 ANKS1BQ7Z6G8 1248 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 RGL4Q8IZJ4 473 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 BHMTQ93088 406 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 IRX2Q9BZI1 471 aaPredicted RBP15.72■□□□□ 0.11
VAPA-209ENST00000585042 PCED1AQ9H1Q7 454 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 MMRN2Q9H8L6 949 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 ZMIZ1Q9ULJ6 1067 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 ZDHHC9Q9Y397 364 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 RAD54BQ9Y620 910 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 PCDH15Q96QU1 1955 aa15.72■□□□□ 0.11
VAPA-209ENST00000585042 XPO1O14980 1071 aaKnown RBP15.71■□□□□ 0.11
VAPA-209ENST00000585042 GJB3O75712 270 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 LATS1O95835 1130 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 TKTL1P51854 596 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 YWHAEP62258 255 aaKnown RBP15.71■□□□□ 0.11
VAPA-209ENST00000585042 GEN1Q17RS7 908 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 PLEKHG6Q3KR16 790 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 MPPE1Q53F39 396 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 KIAA1324Q6UXG2 1013 aaKnown RBP15.71■□□□□ 0.11
VAPA-209ENST00000585042 DENND1CQ8IV53 801 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 SCML4Q8N228 414 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 P2RY11Q96G91 374 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 NUP58Q9BVL2 599 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 RMND1Q9NWS8 449 aa15.71■□□□□ 0.11
VAPA-209ENST00000585042 HBS1LQ9Y450 684 aaKnown RBP15.71■□□□□ 0.11
VAPA-209ENST00000585042 CACNA1EQ15878 2313 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 A0A1B0GTW7 788 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 SLC12A8A0AV02 714 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 SLC16A3O15427 465 aaKnown RBP15.7■□□□□ 0.1
VAPA-209ENST00000585042 TOP3BO95985 862 aaKnown RBP15.7■□□□□ 0.1
VAPA-209ENST00000585042 HMBSP08397 361 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 SPINK2P20155 84 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 IL12RB1P42701 662 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 HARS2P49590 506 aaKnown RBP15.7■□□□□ 0.1
VAPA-209ENST00000585042 BCAT1P54687 386 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 FKBP3Q00688 224 aaKnown RBP15.7■□□□□ 0.1
VAPA-209ENST00000585042 ZNF234Q14588 700 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 TMPRSS6Q8IU80 811 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 RBBP8NLQ8NC74 664 aaPredicted RBP15.7■□□□□ 0.1
VAPA-209ENST00000585042 DDI1Q8WTU0 396 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 PRCCQ92733 491 aaPredicted RBP15.7■□□□□ 0.1
VAPA-209ENST00000585042 TATDN2Q93075 761 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 SIPA1Q96FS4 1042 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 TOE1Q96GM8 510 aaKnown RBP15.7■□□□□ 0.1
VAPA-209ENST00000585042 GSDMAQ96QA5 445 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 MKRN2Q9H000 416 aaKnown RBP15.7■□□□□ 0.1
VAPA-209ENST00000585042 HESX1Q9UBX0 185 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 STOML2Q9UJZ1 356 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 ZFHX4Q86UP3 3567 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 ADAMTS9Q9P2N4 1935 aa15.7■□□□□ 0.1
VAPA-209ENST00000585042 SPAARA0A1B0GVQ0 90 aa15.69■□□□□ 0.1
VAPA-209ENST00000585042 METTL12A8MUP2 240 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms