RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 VARS2Q5ST30 1063 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CLEC20AQ6ZU45 233 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FAM183BPQ6ZVS7 135 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TMEM110Q86TL2 294 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FAM35AQ86V20 835 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PKMYT1Q99640 499 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MIS12Q9H081 205 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RC3H2Q9HBD1 1191 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 METTL5Q9NRN9 209 aaKnown RBP15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 KRT82Q9NSB4 513 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 DNPEPQ9ULA0 475 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 NLRC5Q86WI3 1866 aa15.55■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SIGLEC16A6NMB1 481 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 XPO1O14980 1071 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 UBOX5O94941 541 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ASMTLO95671 621 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 KRT1P04264 644 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 OR4Q2P0C623 313 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FAM200BP0CF97 657 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 KRT3P12035 628 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 NQO1P15559 274 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CREB1P16220 341 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FGFR3P22607 806 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PHBP35232 272 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CDKN2BP42772 138 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MAP3K7CLP57077 242 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CBLBQ13191 982 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 BTG3Q14201 252 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 LRRC14Q15048 493 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 LLGL1Q15334 1064 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MFSD7Q6UXD7 560 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PIGZQ86VD9 579 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SRRM1Q8IYB3 904 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CYP4X1Q8N118 509 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 DENND1AQ8TEH3 1009 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 C9orf72Q96LT7 481 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PITPNM3Q9BZ71 974 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SAYSD1Q9NPB0 183 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ABCF3Q9NUQ8 709 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PTPRDP23468 1912 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 AP1G2O75843 785 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 LCP1P13796 627 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CCNB1P14635 433 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TAC1P20366 129 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RFC1P35251 1148 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 VPS41P49754 854 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CACNA2D1P54289 1103 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SNX16P57768 344 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 NCALDP61601 193 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ELAVL2Q12926 359 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TAZQ16635 292 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 HADHQ16836 314 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 FAM102AQ5T9C2 384 aaPredicted RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RNASEH2BQ5TBB1 312 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TAS1R1Q7RTX1 841 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SCUBE3Q8IX30 993 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ANKRD42Q8N9B4 389 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 JOSD2Q8TAC2 188 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SLC35B2Q8TB61 432 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MGARPQ8TDB4 240 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PIWIL1Q96J94 861 aaKnown RBP15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 HSFY1Q96LI6 401 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SMC6Q96SB8 1091 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SMOQ99835 787 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 NOD2Q9HC29 1040 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CD248Q9HCU0 757 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ARHGEF3Q9NR81 526 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CTNNAL1Q9UBT7 734 aa15.54■□□□□ 0.08
CDK5RAP3-236ENST00000584991 PAPSS1O43252 624 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 BDNFP23560 247 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ALDH3A1P30838 453 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RPL34P49207 117 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RABGGTBP53611 331 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 OGDHQ02218 1023 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 GPS1Q13098 491 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MRPL58Q14197 206 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MAPRE1Q15691 268 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CTXN3Q4LDR2 81 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TMEM240Q5SV17 173 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 KCNT2Q6UVM3 1135 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CMTR2Q8IYT2 770 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SMARCD1Q96GM5 515 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 KCNK16Q96T55 309 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 YME1L1Q96TA2 773 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MYCBPQ99417 103 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CYLDQ9NQC7 956 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TMEM30AQ9NV96 361 aa15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ZMYND8Q9ULU4 1186 aaPredicted RBP15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 MRPL42Q9Y6G3 142 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ACADSBP45954 432 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SLC6A3Q01959 620 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ZNF252P-AS1Q0IIN9 211 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 SLC39A12Q504Y0 691 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 RTP2Q5QGT7 225 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 DAB2IPQ5VWQ8 1189 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ASRGL1Q7L266 308 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 EMC1Q8N766 993 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ZMIZ2Q8NF64 920 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ZNF398Q8TD17 642 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms