RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 AP1G2O75843 785 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 OAS1P00973 400 aaKnown RBP11.76□□□□□ -0.53
CCDC47-206ENST00000584112 ASPAP45381 313 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 GALK1P51570 392 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 NUCB2P80303 420 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 ADAM9Q13443 819 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 SMAD1Q15797 465 aaKnown RBP11.76□□□□□ -0.53
CCDC47-206ENST00000584112 EDRF1Q3B7T1 1238 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 KRTAP21-3Q3LHN1 58 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 ACOT1Q86TX2 421 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 FUKQ8N0W3 1084 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 CRYBG2Q8N1P7 616 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 MDGA1Q8NFP4 955 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 NAF1Q96HR8 494 aaKnown RBP11.76□□□□□ -0.53
CCDC47-206ENST00000584112 KCNK16Q96T55 309 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 SDCBP2Q9H190 292 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 GDPD2Q9HCC8 539 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 KRT82Q9NSB4 513 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 MAPK8IP1Q9UQF2 711 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 CPQQ9Y646 472 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 CELSR1Q9NYQ6 3014 aa11.76□□□□□ -0.53
CCDC47-206ENST00000584112 A0A1B0GTL3 188 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 ANTXRLA6NF34 631 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 E9PAM4 449 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 STX10O60499 249 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 AFPP02771 609 aaKnown RBP11.75□□□□□ -0.53
CCDC47-206ENST00000584112 TRIM49P0CI25 452 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 TRIM49CP0CI26 452 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 MBL2P11226 248 aaPredicted RBP11.75□□□□□ -0.53
CCDC47-206ENST00000584112 GTF2H1P32780 548 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 GCLMP48507 274 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 TUBP50607 506 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 NDST1P52848 882 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 SLC5A3P53794 718 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 INCA1Q0VD86 236 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 ZCWPW2Q504Y3 356 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 C1orf220Q5T0J3 134 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 SNX30Q5VWJ9 437 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 SPOPLQ6IQ16 392 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 DHRS13Q6UX07 377 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 ATG14Q6ZNE5 492 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 PAQR9Q6ZVX9 377 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 RASSF3Q86WH2 238 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 EZH1Q92800 747 aaPredicted RBP11.75□□□□□ -0.53
CCDC47-206ENST00000584112 ACDQ96AP0 544 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 ELMO3Q96BJ8 720 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 GTPBP4Q9BZE4 634 aaKnown RBP11.75□□□□□ -0.53
CCDC47-206ENST00000584112 NIF3L1Q9GZT8 377 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 RNF38Q9H0F5 515 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 FBXO44Q9H4M3 255 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 CYP3A43Q9HB55 503 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 TMEM8AQ9HCN3 771 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 IL37Q9NZH6 218 aa11.75□□□□□ -0.53
CCDC47-206ENST00000584112 HOOK1Q9UJC3 728 aaKnown RBP11.75□□□□□ -0.53
CCDC47-206ENST00000584112 FAM92AA1XBS5 289 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 CETN3O15182 167 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 SMC2O95347 1197 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 FAM200BP0CF97 657 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 EPB41P11171 864 aaKnown RBP11.74□□□□□ -0.53
CCDC47-206ENST00000584112 CCDC130P13994 396 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 P2RY2P41231 377 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 ZXDBP98169 803 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 PPP3CAQ08209 521 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 HECTD3Q5T447 861 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 KRT39Q6A163 491 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 FILIP1Q7Z7B0 1213 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 FMR1NBQ8N0W7 255 aaPredicted RBP11.74□□□□□ -0.53
CCDC47-206ENST00000584112 TTC39CQ8N584 583 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 SCAMP5Q8TAC9 235 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 OLIG1Q8TAK6 271 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 CEP76Q8TAP6 659 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 BAHD1Q8TBE0 780 aaPredicted RBP11.74□□□□□ -0.53
CCDC47-206ENST00000584112 SLC2A14Q8TDB8 520 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 OTUB2Q96DC9 234 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 FAXDC2Q96IV6 333 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 GSDMAQ96QA5 445 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 TSG101Q99816 390 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 NT5C1AQ9BXI3 368 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 LINC00597Q9H2U6 94 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 MMRN2Q9H8L6 949 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 CSNK1G1Q9HCP0 422 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 SMPD4Q9NXE4 827 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 CFAP97Q9P2B7 532 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 TBC1D14Q9P2M4 693 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 HMGXB4Q9UGU5 601 aa11.74□□□□□ -0.53
CCDC47-206ENST00000584112 ADGRG4Q8IZF6 3080 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 E2F8A0AVK6 867 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 COCHO43405 550 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 ADH1CP00326 375 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 CYP17A1P05093 508 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 SYPP08247 313 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 ADORA2BP29275 332 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 EIF2DP41214 584 aaKnown RBP11.73□□□□□ -0.53
CCDC47-206ENST00000584112 MXI1P50539 228 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 MAP3K7CLP57077 242 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
CCDC47-206ENST00000584112 ORC1Q13415 861 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 PNOCQ13519 176 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 COBLL1Q53SF7 1204 aa11.73□□□□□ -0.53
CCDC47-206ENST00000584112 ZNF658Q5TYW1 1059 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms