RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CHRM1P11229 460 aaPredicted RBP21.3■■□□□ 1
SS18-224ENST00000584083 KRT9P35527 623 aa21.3■■□□□ 1
SS18-224ENST00000584083 CDKAL1Q5VV42 579 aa21.3■■□□□ 1
SS18-224ENST00000584083 FYB2Q5VWT5 728 aa21.3■■□□□ 1
SS18-224ENST00000584083 SMYD5Q6GMV2 418 aa21.3■■□□□ 1
SS18-224ENST00000584083 TMEM92Q6UXU6 159 aa21.3■■□□□ 1
SS18-224ENST00000584083 C11orf57Q6ZUT1 292 aaPredicted RBP21.3■■□□□ 1
SS18-224ENST00000584083 FAM160A2Q8N612 972 aaPredicted RBP21.3■■□□□ 1
SS18-224ENST00000584083 POLMQ9NP87 494 aaPredicted RBP21.3■■□□□ 1
SS18-224ENST00000584083 FANCLQ9NW38 375 aa21.3■■□□□ 1
SS18-224ENST00000584083 CAPN9O14815 690 aa21.29■■□□□ 1
SS18-224ENST00000584083 PAPSS1O43252 624 aaPredicted RBP21.29■■□□□ 1
SS18-224ENST00000584083 TSPAN3O60637 253 aa21.29■■□□□ 1
SS18-224ENST00000584083 CISD3P0C7P0 127 aa21.29■■□□□ 1
SS18-224ENST00000584083 CLCN1P35523 988 aa21.29■■□□□ 1
SS18-224ENST00000584083 TBX4P57082 545 aa21.29■■□□□ 1
SS18-224ENST00000584083 BPIFB4P59827 614 aa21.29■■□□□ 1
SS18-224ENST00000584083 PDCLQ13371 301 aa21.29■■□□□ 1
SS18-224ENST00000584083 DRAP1Q14919 205 aaPredicted RBP21.29■■□□□ 1
SS18-224ENST00000584083 KRT31Q15323 416 aa21.29■■□□□ 1
SS18-224ENST00000584083 KLHDC7AQ5VTJ3 777 aa21.29■■□□□ 1
SS18-224ENST00000584083 CACNA2D4Q7Z3S7 1137 aa21.29■■□□□ 1
SS18-224ENST00000584083 TMEM110Q86TL2 294 aa21.29■■□□□ 1
SS18-224ENST00000584083 SLC47A2Q86VL8 602 aa21.29■■□□□ 1
SS18-224ENST00000584083 FAM71AQ8IYT1 594 aa21.29■■□□□ 1
SS18-224ENST00000584083 P2RY11Q96G91 374 aa21.29■■□□□ 1
SS18-224ENST00000584083 TRIM62Q9BVG3 475 aa21.29■■□□□ 1
SS18-224ENST00000584083 TPSD1Q9BZJ3 242 aa21.29■■□□□ 1
SS18-224ENST00000584083 PCDHGC3Q9UN70 934 aa21.29■■□□□ 1
SS18-224ENST00000584083 NAALADL1Q9UQQ1 740 aa21.29■■□□□ 1
SS18-224ENST00000584083 STARD13Q9Y3M8 1113 aa21.29■■□□□ 1
SS18-224ENST00000584083 FHOD1Q9Y613 1164 aa21.29■■□□□ 1
SS18-224ENST00000584083 PRRT4C9JH25 899 aa21.28■■□□□ 1
SS18-224ENST00000584083 ADAM23O75077 832 aa21.28■■□□□ 1
SS18-224ENST00000584083 FYNP06241 537 aa21.28■■□□□ 1
SS18-224ENST00000584083 RETP07949 1114 aa21.28■■□□□ 1
SS18-224ENST00000584083 HNRNPLP14866 589 aaKnown RBP eCLIP21.28■■□□□ 11e-9■■■■■ 30.1
SS18-224ENST00000584083 WASP42768 502 aa21.28■■□□□ 1
SS18-224ENST00000584083 MPPE1Q53F39 396 aa21.28■■□□□ 1
SS18-224ENST00000584083 ADGRF1Q5T601 910 aa21.28■■□□□ 1
SS18-224ENST00000584083 EGFLAMQ63HQ2 1017 aa21.28■■□□□ 1
SS18-224ENST00000584083 NUGGCQ68CJ6 796 aa21.28■■□□□ 1
SS18-224ENST00000584083 SDE2Q6IQ49 451 aa21.28■■□□□ 1
SS18-224ENST00000584083 DPY19L2P1Q6NXN4 242 aa21.28■■□□□ 1
SS18-224ENST00000584083 KBTBD6Q86V97 674 aa21.28■■□□□ 1
SS18-224ENST00000584083 UNC45BQ8IWX7 931 aa21.28■■□□□ 1
SS18-224ENST00000584083 FAM217AQ8IXS0 508 aa21.28■■□□□ 1
SS18-224ENST00000584083 WDTC1Q8N5D0 677 aa21.28■■□□□ 1
SS18-224ENST00000584083 GPR161Q8N6U8 529 aaKnown RBP21.28■■□□□ 1
SS18-224ENST00000584083 DQX1Q8TE96 717 aaKnown RBP21.28■■□□□ 1
SS18-224ENST00000584083 PPP1R13BQ96KQ4 1090 aa21.28■■□□□ 1
SS18-224ENST00000584083 NOX5Q96PH1 765 aa21.28■■□□□ 1
SS18-224ENST00000584083 LHX5Q9H2C1 402 aa21.28■■□□□ 1
SS18-224ENST00000584083 PDCL3Q9H2J4 239 aa21.28■■□□□ 1
SS18-224ENST00000584083 FBXO10Q9UK96 956 aa21.28■■□□□ 1
SS18-224ENST00000584083 USP18Q9UMW8 372 aa21.28■■□□□ 1
SS18-224ENST00000584083 INVSQ9Y283 1065 aa21.28■■□□□ 1
SS18-224ENST00000584083 CEP83Q9Y592 693 aa21.28■■□□□ 1
SS18-224ENST00000584083 LATS1O95835 1130 aa21.27■■□□□ 1
SS18-224ENST00000584083 IGLV3-27P01718 113 aa21.27■■□□□ 1
SS18-224ENST00000584083 NTSR1P30989 418 aa21.27■■□□□ 1
SS18-224ENST00000584083 SLC11A2P49281 568 aa21.27■■□□□ 1
SS18-224ENST00000584083 MYL5Q02045 173 aa21.27■■□□□ 1
SS18-224ENST00000584083 SPEM2Q0P670 501 aa21.27■■□□□ 1
SS18-224ENST00000584083 USP39Q53GS9 565 aaKnown RBP21.27■■□□□ 1
SS18-224ENST00000584083 FKBP15Q5T1M5 1219 aa21.27■■□□□ 1
SS18-224ENST00000584083 RASSF3Q86WH2 238 aa21.27■■□□□ 1
SS18-224ENST00000584083 CHPFQ8IZ52 775 aa21.27■■□□□ 1
SS18-224ENST00000584083 PGBD3Q8N328 593 aa21.27■■□□□ 1
SS18-224ENST00000584083 ANKRD20A12PQ8NF67 263 aa21.27■■□□□ 1
SS18-224ENST00000584083 MDGA1Q8NFP4 955 aa21.27■■□□□ 1
SS18-224ENST00000584083 BCCIPQ9P287 314 aaKnown RBP eCLIP21.27■■□□□ 1
SS18-224ENST00000584083 SLC27A6Q9Y2P4 619 aa21.27■■□□□ 1
SS18-224ENST00000584083 HOXB2P14652 356 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 UCHL3P15374 230 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 ZNF445P59923 1031 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 YWHAZP63104 245 aaKnown RBP21.26■□□□□ 0.99
SS18-224ENST00000584083 RING1Q06587 406 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 SYPL2Q5VXT5 272 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 BEND5Q7L4P6 421 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 C1orf131Q8NDD1 294 aaKnown RBP21.26■□□□□ 0.99
SS18-224ENST00000584083 ADAM32Q8TC27 787 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 TMA16Q96EY4 203 aaKnown RBP21.26■□□□□ 0.99
SS18-224ENST00000584083 SERPINB11Q96P15 392 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 CPXM1Q96SM3 734 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 ACOX2Q99424 681 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 SLC2A11Q9BYW1 496 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 SYNCQ9H7C4 482 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 POPDC2Q9HBU9 364 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 PLCB1Q9NQ66 1216 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 TJP2Q9UDY2 1190 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 STOML2Q9UJZ1 356 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 HCN2Q9UL51 889 aa21.26■□□□□ 0.99
SS18-224ENST00000584083 THADAQ6YHU6 1953 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 TCRBV21S2A2A0A5A6 115 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 DCLK1O15075 740 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 CDK11BP21127 795 aaKnown RBP21.25■□□□□ 0.99
SS18-224ENST00000584083 GBP1P32455 592 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 SNX16P57768 344 aa21.25■□□□□ 0.99
SS18-224ENST00000584083 GEN1Q17RS7 908 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms