RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 MFAP3P55082 362 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 RING1Q06587 406 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 NNTQ13423 1086 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 GOLGA7BQ2TAP0 167 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 EGFLAMQ63HQ2 1017 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 TPGS1Q6ZTW0 290 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 RSRC2Q7L4I2 434 aaKnown RBP15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 MIB1Q86YT6 1006 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 IPO4Q8TEX9 1081 aaKnown RBP15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 HMGB4Q8WW32 186 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 PIWIL1Q96J94 861 aaKnown RBP15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 EDEM2Q9BV94 578 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 RXFP3Q9NSD7 469 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 BCCIPQ9P287 314 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 THAP10Q9P2Z0 257 aaPredicted RBP15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 MBD1Q9UIS9 605 aaPredicted RBP15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 PILRBQ9UKJ0 227 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 MAN1B1Q9UKM7 699 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 KNL1Q8NG31 2342 aa15.17■□□□□ 0.02
SMARCE1-216ENST00000580419 TRIM49BA6NDI0 452 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 ANTXRLA6NF34 631 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 MDM4O15151 490 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 IRAK2O43187 625 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 MAP3K13O43283 966 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 SART1O43290 800 aaKnown RBP15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 FBXO21O94952 628 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 FGFR1OPO95684 399 aaKnown RBP15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 IGLV3-19P01714 112 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 IGLV3-27P01718 113 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 BMP6P22004 513 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 PMLP29590 882 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 EFEMP1Q12805 493 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 MPPE1Q53F39 396 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 ADGRF1Q5T601 910 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 BSPRYQ5W0U4 402 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 ENOSF1Q7L5Y1 443 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 SIX6OS1Q8N1H7 587 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 RBBP8NLQ8NC74 664 aaPredicted RBP15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 STK32AQ8WU08 396 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 IPO9Q96P70 1041 aaKnown RBP15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 TRIM62Q9BVG3 475 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 NUSAP1Q9BXS6 441 aaKnown RBP15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 ULBP1Q9BZM6 244 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 PCED1AQ9H1Q7 454 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 FBRSQ9HAH7 460 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 TMEM9BQ9NQ34 198 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 CALCOCO1Q9P1Z2 691 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 RASAL2Q9UJF2 1139 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 NUDT5Q9UKK9 219 aa15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMARCE1-216ENST00000580419 CABIN1Q9Y6J0 2220 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 CDX4O14627 284 aaPredicted RBP15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 TRIM24O15164 1050 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 CEACAM1P13688 526 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 DAOAP59103 153 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 STARD3Q14849 445 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 DUOXA1Q1HG43 343 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 LYSMD4Q5XG99 296 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 TMEM270Q6UE05 265 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 TOGARAM2Q6ZUX3 1019 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 ANKS1BQ7Z6G8 1248 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 KIAA0907Q7Z7F0 614 aaPredicted RBP15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 UNC45BQ8IWX7 931 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 WFIKKN2Q8TEU8 576 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 RNF139Q8WU17 664 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 FOXJ1Q92949 421 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 ZNF419Q96HQ0 510 aaPredicted RBP15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 MRGPRX1Q96LB2 322 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 ELOVL2Q9NXB9 296 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 USP24Q9UPU5 2620 aa15.15■□□□□ 0.02
SMARCE1-216ENST00000580419 IGHV1OR15-9A0A0B4J2B8 117 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 SLC12A8A0AV02 714 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 KCNK5O95279 499 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 SERPINF2P08697 491 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 CD19P15391 556 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 NDUFV2P19404 249 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 OXTRP30559 389 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 DHPSP49366 369 aaPredicted RBP15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 ADIGQ0VDE8 80 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 PAK1Q13153 545 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 CCDC6Q16204 474 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 CCDC40Q4G0X9 1142 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 NUGGCQ68CJ6 796 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 DENND1CQ8IV53 801 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 EHBP1Q8NDI1 1231 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 CADM4Q8NFZ8 388 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 NELFBQ8WX92 580 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 CAPN10Q9HC96 672 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 USP36Q9P275 1121 aaKnown RBP15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 SLC6A14Q9UN76 642 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 STON1Q9Y6Q2 735 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 PCDH15Q96QU1 1955 aa15.14■□□□□ 0.01
SMARCE1-216ENST00000580419 YJEFN3A6XGL0 299 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 E7ENQ6 273 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 TULP2O00295 520 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 HOXD9P28356 352 aaPredicted RBP15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 PTGER3P43115 390 aa15.13■□□□□ 0.01
SMARCE1-216ENST00000580419 ACADSBP45954 432 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms