RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 SPDYAQ5MJ70 313 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 LRRC38Q5VT99 294 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 TAS2R42Q7RTR8 314 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 ADAM32Q8TC27 787 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 AFG1LQ8WV93 481 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 UCMAQ8WVF2 138 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 TUBGCP3Q96CW5 907 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 CEP19Q96LK0 163 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 ERAP1Q9NZ08 941 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 ATP8B3O60423 1300 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 TMEM191CA6NGB0 347 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 PRPF4O43172 522 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 PHGDHO43175 533 aaKnown RBP13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 CSPG5O95196 566 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 ZBTB7AO95365 584 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 NFKBIAP25963 317 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 TM4SF1P30408 202 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 ACADSBP45954 432 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 PLK1P53350 603 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 DAB2P98082 770 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 POU6F1Q14863 301 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 C16orf72Q14CZ0 275 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 MARK2Q7KZI7 788 aaKnown RBP13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 XPNPEP3Q9NQH7 507 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 NRXN3Q9Y4C0 1643 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 RNF103O00237 685 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 VWA5AO00534 786 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 ASMTLO95671 621 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 HMBSP08397 361 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 ZNF23P17027 643 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 ETFBP38117 255 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 KYAT1Q16773 422 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 KIZQ2M2Z5 673 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 PTAR1Q7Z6K3 402 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 CELF6Q96J87 481 aaKnown RBP13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 BEGAINQ9BUH8 593 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 CCDC167Q9P0B6 97 aa13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 WRAP73Q9P2S5 460 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC8-207ENST00000580104 ALDH1A3P47895 512 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 NIPA1Q7RTP0 329 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 ABI1Q8IZP0 508 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 ACSS2Q9NR19 701 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 AFF4Q9UHB7 1163 aaKnown RBP13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 SPDYE5A6NIY4 337 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 SUPT3HB4E1H0 165 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 HSPA1AP0DMV8 641 aaKnown RBP13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 HSPA1BP0DMV9 641 aaKnown RBP13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 HOXD13P35453 343 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 KCTD21Q4G0X4 260 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 NBPF12Q5TAG4 269 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 BHLHE22Q8NFJ8 381 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 BSNDQ8WZ55 320 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 CPT1BQ92523 772 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 HACL1Q9UJ83 578 aa13.96□□□□□ -0.17
TRAPPC8-207ENST00000580104 IGLV3-22A0A075B6J6 115 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 NR5A2O00482 541 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 TNFAIP8O95379 198 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 APOA4P06727 396 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 NELFEP18615 380 aaKnown RBP13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 TMED10P49755 219 aaKnown RBP13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 TSPY1Q01534 308 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 ZNF235Q14590 738 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 C15orf52Q6ZUT6 534 aaKnown RBP13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 DMAC2Q9NW81 257 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 TRDMT1O14717 391 aaKnown RBP13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 ME2P23368 584 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 NAGLUP54802 743 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 USP4Q13107 963 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 ACVR2BQ13705 512 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 KYAT3Q6YP21 454 aaKnown RBP13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 FBXO16Q8IX29 292 aaPredicted RBP13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 SHCBP1Q8NEM2 672 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 SLC10A4Q96EP9 437 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 MFSD14AQ96MC6 490 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 ZNF570Q96NI8 536 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 PNPOQ9NVS9 261 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 UBIAD1Q9Y5Z9 338 aa13.96□□□□□ -0.18
TRAPPC8-207ENST00000580104 LACTBL1A8MY62 500 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 PIGNO95427 931 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 CHN2P52757 468 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 C12orf50Q8NA57 414 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 ATXN3LQ9H3M9 355 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 MAP3K20Q9NYL2 800 aaKnown RBP13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 LGALS13Q9UHV8 139 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 BARX2Q9UMQ3 279 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 ALBP02768 609 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 MMP8P22894 467 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 PSMA4P25789 261 aaKnown RBP13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 CLVS1Q8IUQ0 354 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 APOBEC3FQ8IUX4 373 aaKnown RBP13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 THEM5Q8N1Q8 247 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 TSPAN17Q96FV3 270 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 APBA2Q99767 749 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 SIKE1Q9BRV8 207 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 WDCPQ9H6R7 721 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 NCKIPSDQ9NZQ3 722 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 CHADO15335 359 aa13.95□□□□□ -0.18
TRAPPC8-207ENST00000580104 CD48P09326 243 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms