RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 SDCCAG8Q86SQ7 713 aaPredicted RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 MICU3Q86XE3 530 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 PPP1R3BQ86XI6 285 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ERC1Q8IUD2 1116 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 SLC44A2Q8IWA5 706 aaPredicted RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 YAF2Q8IY57 180 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 TAGAPQ8N103 731 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 CREB3L4Q8TEY5 395 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 GCDHQ92947 438 aaPredicted RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 RNF125Q96EQ8 232 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 TMX3Q96JJ7 454 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF512Q96ME7 567 aaPredicted RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 JAKMIP1Q96N16 626 aaKnown RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 EYA3Q99504 573 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 P2RX7Q99572 595 aaKnown RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 RTKNQ9BST9 563 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 XPO4Q9C0E2 1151 aaKnown RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 TWSG1Q9GZX9 223 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 OR10A4Q9H209 315 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 EPS8L2Q9H6S3 715 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 SMURF2Q9HAU4 748 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 A1CFQ9NQ94 594 aaKnown RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 CCDC177Q9NQR7 707 aaPredicted RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 WWOXQ9NZC7 414 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 TMOD4Q9NZQ9 345 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 TBC1D14Q9P2M4 693 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 RASAL2Q9UJF2 1139 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 CA14Q9ULX7 337 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 C19orf53Q9UNZ5 99 aaPredicted RBP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 MED16Q9Y2X0 877 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 KNSTRNQ9Y448 316 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ZNF711Q9Y462 761 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.42□□□□□ -1.86
KPNB1-208ENST00000580019 UHRF1BP1Q6BDS2 1440 aa3.42□□□□□ -1.86
KPNB1-208ENST00000580019 ARAP3Q8WWN8 1544 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MBD3L4A6NDZ8 208 aaPredicted RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MBD3L3A6NE82 208 aaPredicted RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 H0Y3Z8 333 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 RNASET2O00584 256 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 KCNQ3O43525 872 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 CLTBP09497 229 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 CSF1P09603 554 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 NR2F1P10589 423 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 TXNP10599 105 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 JUPP14923 745 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 GNAT2P19087 354 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 SCP2P22307 547 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 KLRC1P26715 233 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 IL1R2P27930 398 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 ATP5DP30049 168 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 ADSLP30566 484 aaPredicted RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 KIF5BP33176 963 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 NNMTP40261 264 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MLH1P40692 756 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 PRKAA2P54646 552 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 BCAT1P54687 386 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 SOX8P57073 446 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MC1RQ01726 317 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MEF2AQ02078 507 aaPredicted RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 CREB5Q02930 508 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MGAT5Q09328 741 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 NEXNQ0ZGT2 675 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 SCAPQ12770 1279 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 EPS8Q12929 822 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 TARDBPQ13148 414 aaKnown RBP eCLIP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 GPR68Q15743 365 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 GAGE13Q4V321 117 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 DNAJC21Q5F1R6 531 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 SNX30Q5VWJ9 437 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 PLBD1Q6P4A8 553 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 CPLX2Q6PUV4 134 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 RAB11FIP2Q7L804 512 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 CCDC91Q7Z6B0 441 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 ANKS1BQ7Z6G8 1248 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 UBE2Q1Q7Z7E8 422 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 UNC45BQ8IWX7 931 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 DIS3L2Q8IYB7 885 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 ADSSL1Q8N142 457 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 CARNMT1Q8N4J0 409 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 CELF5Q8N6W0 485 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 AVL9Q8NBF6 648 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MGARPQ8TDB4 240 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MAML1Q92585 1016 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 TBC1D5Q92609 795 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 TNPO1Q92973 898 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 CALML4Q96GE6 196 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 SPAG5Q96R06 1193 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 REEP2Q9BRK0 252 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 EDEM3Q9BZQ6 932 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 PITHD1Q9GZP4 211 aaPredicted RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 TSPY26PQ9H489 355 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 RNPEPQ9H4A4 650 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 RABEP2Q9H5N1 569 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 ACAD9Q9H845 621 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 XAB2Q9HCS7 855 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 HEYLQ9NQ87 328 aaPredicted RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 PRDM8Q9NQV8 689 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 UCKL1Q9NWZ5 548 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms