RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 ADAM9Q13443 819 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 HNRNPDQ14103 355 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 ZCWPW2Q504Y3 356 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 SYCP2LQ5T4T6 812 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 TMEM215Q68D42 235 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 ARHGAP17Q68EM7 881 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 PM20D1Q6GTS8 502 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 RAB44Q7Z6P3 723 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 FAM217AQ8IXS0 508 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 FAM186BQ8IYM0 893 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 GUF1Q8N442 669 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 CHCHD4Q8N4Q1 142 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 SLC4A11Q8NBS3 891 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 CADM4Q8NFZ8 388 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 TOE1Q96GM8 510 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 HEXIM2Q96MH2 286 aaKnown RBP11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 CAMK1GQ96NX5 476 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 IMPG2Q9BZV3 1241 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 DCLK3Q9C098 648 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 PRDM16Q9HAZ2 1276 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 ELOVL2Q9NXB9 296 aa11.18□□□□□ -0.62
CSNK1D-210ENST00000579308 ATRXP46100 2492 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 PLXND1Q9Y4D7 1925 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 SMG1Q96Q15 3661 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 TNRC6BQ9UPQ9 1833 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 TAF4O00268 1085 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 TIMM44O43615 452 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 CBFA2T3O75081 653 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 NDUFS2O75306 463 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 RPL13P26373 211 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 MAOBP27338 520 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 CORO1AP31146 461 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 NDUFA8P51970 172 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 COPAP53621 1224 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 RAD23BP54727 409 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 EFEMP1Q12805 493 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 TRIP6Q15654 476 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 ZNF423Q2M1K9 1284 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 PLEKHG6Q3KR16 790 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 ZNF394Q53GI3 561 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 WDR45BQ5MNZ6 344 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 KRT39Q6A163 491 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 KIAA1324Q6UXG2 1013 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 BHLHA9Q7RTU4 235 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 TMPRSS6Q8IU80 811 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 RGL4Q8IZJ4 473 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 CPXM2Q8N436 756 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 ANKRD52Q8NB46 1076 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 C1orf216Q8TAB5 229 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 ZCCHC14Q8WYQ9 949 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 TMEM176AQ96HP8 235 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 ZDHHC5Q9C0B5 715 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 CISHQ9NSE2 258 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 SUSD2Q9UGT4 822 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 MAPK8IP1Q9UQF2 711 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 ZDHHC9Q9Y397 364 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 PCDH15Q96QU1 1955 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 PI4KAP42356 2102 aa11.17□□□□□ -0.62
CSNK1D-210ENST00000579308 METTL12A8MUP2 240 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 HMBSP08397 361 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 KRT13P13646 458 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 GNSP15586 552 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 OXTRP30559 389 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 SYKP43405 635 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 TPMTP51580 245 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 BNC1Q01954 994 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 GRIK2Q13002 908 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 STARD3Q14849 445 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 TRIP4Q15650 581 aaPredicted RBP11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 DBX2Q6ZNG2 339 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 PIGZQ86VD9 579 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 DENND1CQ8IV53 801 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 ARHGAP18Q8N392 663 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 SORCS1Q8WY21 1168 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 NDRG1Q92597 394 aaKnown RBP11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 TATDN2Q93075 761 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 ARID3AQ99856 593 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 GPR174Q9BXC1 333 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 SLC2A11Q9BYW1 496 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 DNAI2Q9GZS0 605 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 MARCH2Q9P0N8 246 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 RASAL2Q9UJF2 1139 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 STOML2Q9UJZ1 356 aa11.16□□□□□ -0.62
CSNK1D-210ENST00000579308 A0A1B0GTW7 788 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 SLC12A8A0AV02 714 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 TULP2O00295 520 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 SYNCRIPO60506 623 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 ZBED1O96006 694 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 NCAM1P13591 858 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 PRKCHP24723 683 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 RDXP35241 583 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 YWHAGP61981 247 aaKnown RBP eCLIP11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 ZNF234Q14588 700 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 EIF4HQ15056 248 aaKnown RBP11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 E2F5Q15329 346 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 EDRF1Q3B7T1 1238 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 LRSAM1Q6UWE0 723 aa11.15□□□□□ -0.62
CSNK1D-210ENST00000579308 KRBA2Q6ZNG9 492 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms