RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 SYCP1Q15431 976 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 PTPROQ16827 1216 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 EXOC3L4Q17RC7 722 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC5A9Q2M3M2 681 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 LEXMQ3ZCV2 418 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 SLC39A12Q504Y0 691 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 FIGNQ5HY92 759 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 RAB41Q5JT25 222 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 ARHGAP17Q68EM7 881 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 GBP6Q6ZN66 633 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CLEC20AQ6ZU45 233 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 SPATA31D4Q6ZUB0 917 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 RRAGAQ7L523 313 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 GPRIN1Q7Z2K8 1008 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 GPR149Q86SP6 731 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 USP37Q86T82 979 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 ACOT1Q86TX2 421 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 RBM23Q86U06 439 aaKnown RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 TTC30AQ86WT1 665 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CEP57Q86XR8 500 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 PALB2Q86YC2 1186 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 GLYCTKQ8IVS8 523 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 FAM71AQ8IYT1 594 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 WDTC1Q8N5D0 677 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 C12orf76Q8N812 135 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 C12orf29Q8N999 325 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 ATAD1Q8NBU5 361 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 KREMEN2Q8NCW0 462 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 RNF214Q8ND24 703 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 STKLD1Q8NE28 680 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 MAFAQ8NHW3 353 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 MYCBPAPQ8TBZ2 947 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 JAKMIP2Q96AA8 810 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 FUBP3Q96I24 572 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 NT5C1BQ96P26 610 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 PGLYRP2Q96PD5 576 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 HNRNPABQ99729 332 aaKnown RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 SMOQ99835 787 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 TTLL2Q9BWV7 592 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 ZNF518BQ9C0D4 1074 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 XPO4Q9C0E2 1151 aaKnown RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 NAT10Q9H0A0 1025 aaKnown RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 PLEKHA4Q9H4M7 779 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 GSX1Q9H4S2 264 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 TLE6Q9H808 572 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 UBE2ZQ9H832 354 aaPredicted RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 MAN1C1Q9NR34 630 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 DZANK1Q9NVP4 752 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 CYTH4Q9UIA0 394 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 NOCTQ9UK39 431 aaKnown RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 DNAJC12Q9UKB3 198 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 GTF3C4Q9UKN8 822 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 MAFFQ9ULX9 164 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 AP4E1Q9UPM8 1137 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 SSX2IPQ9Y2D8 614 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 YIPF1Q9Y548 306 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 INSL5Q9Y5Q6 135 aa4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 TNRC6BQ9UPQ9 1833 aaKnown RBP4.02□□□□□ -1.77
SMARCE1-215ENST00000578995 TCRBV5S1A1TA0A578 114 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SMTNL1A8MU46 457 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 A8MXQ7 604 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 FOXN3O00409 490 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 MBTPS2O43462 519 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 OLFM2O95897 454 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 PAEPP09466 180 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 PDGFRBP09619 1106 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 HNRNPA1P09651 372 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 ZDHHC11BP0C7U3 371 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 CD58P19256 250 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 RFX1P22670 979 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 FCARP24071 287 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 TBXAS1P24557 533 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 CYP2F1P24903 491 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 BRD2P25440 801 aaKnown RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 KLRC2P26717 231 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 PCSK1P29120 753 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 HNRNPH3P31942 346 aaKnown RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 CDH5P33151 784 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 GNL1P36915 607 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 GPD2P43304 727 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 KCNQ1P51787 676 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 TNNC1P63316 161 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 NTHL1P78549 312 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 GSTM4Q03013 218 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 TFF2Q03403 129 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 ADCY1Q08828 1119 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 PTP4A2Q12974 167 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 DUSP4Q13115 394 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SMAD4Q13485 552 aaKnown RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 MTMR3Q13615 1198 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 DRAP1Q14919 205 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 CCDC85BQ15834 202 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 MEA1Q16626 185 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 TPD52L1Q16890 204 aaPredicted RBP4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 MDH1BQ5I0G3 518 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 SDHAF4Q5VUM1 108 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 KIAA1841Q6NSI8 718 aa4.01□□□□□ -1.77
SMARCE1-215ENST00000578995 LLGL2Q6P1M3 1020 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms