RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 C1orf131Q8NDD1 294 aaKnown RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 TSTD1Q8NFU3 115 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 UCMAQ8WVF2 138 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 CPA5Q8WXQ8 436 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 C18orf8Q96DM3 657 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 SERPINB11Q96P15 392 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 BPIFA3Q9BQP9 254 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 FAM204AQ9H8W3 233 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 POLMQ9NP87 494 aaPredicted RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 PRMT8Q9NR22 394 aaPredicted RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 STIM2Q9P246 746 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 NCDNQ9UBB6 729 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 AJAP1Q9UKB5 411 aaPredicted RBP6.83□□□□□ -1.32
TRAF4-213ENST00000578917 PCDHGC3Q9UN70 934 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 VPS13AQ96RL7 3174 aa6.83□□□□□ -1.32
TRAF4-213ENST00000578917 ZNF292O60281 2723 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 PROB1E7EW31 1015 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 GOLGA8SH3BPF8 625 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 TRIM24O15164 1050 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 AXIN1O15169 862 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 PAPSS1O43252 624 aaPredicted RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 MAP3K13O43283 966 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 GREM1O60565 184 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 HSF2BPO75031 334 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 APBB3O95704 486 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 LSM8O95777 96 aaKnown RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 CAVIN2O95810 425 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 TRUB2O95900 331 aaKnown RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 GLI1P08151 1106 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 SLC2A3P11169 496 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 ZNF18P17022 549 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 CNR2P34972 360 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 WASP42768 502 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 ZNF445P59923 1031 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 MRPS21P82921 87 aaKnown RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 SLC6A3Q01959 620 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 RING1Q06587 406 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 SIM2Q14190 667 aaPredicted RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 TAF5Q15542 800 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 LPAL2Q16609 132 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 USP39Q53GS9 565 aaKnown RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 ZC3H12AQ5D1E8 599 aaKnown RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 EOGTQ5NDL2 527 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 SYPL2Q5VXT5 272 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 NAA35Q5VZE5 725 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 ANO7Q6IWH7 933 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 PKN3Q6P5Z2 889 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 RFWD3Q6PCD5 774 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 Q6ZNB5 142 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 SYT13Q7L8C5 426 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 BHLHA9Q7RTU4 235 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 NOP9Q86U38 636 aaKnown RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 C12orf40Q86WS4 652 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 ZNF677Q86XU0 584 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 ZDHHC17Q8IUH5 632 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 DEFB106AQ8N104 65 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 WDTC1Q8N5D0 677 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 ZNF513Q8N8E2 541 aaPredicted RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 TXNDC5Q8NBS9 432 aaKnown RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 KCNV2Q8TDN2 545 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 DQX1Q8TE96 717 aaKnown RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 USP33Q8TEY7 942 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 HHIPQ96QV1 700 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 CPXM1Q96SM3 734 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 NAA15Q9BXJ9 866 aaKnown RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 CIPCQ9C0C6 399 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 POLR3BQ9NW08 1133 aaPredicted RBP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.82□□□□□ -1.32
TRAF4-213ENST00000578917 DDIT4Q9NX09 232 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 MARK1Q9P0L2 795 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 TJP2Q9UDY2 1190 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 CYTH4Q9UIA0 394 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 PLA2G4CQ9UP65 541 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 TLR6Q9Y2C9 796 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 DAAM1Q9Y4D1 1078 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 PAXBP1Q9Y5B6 917 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 GPR179Q6PRD1 2367 aa6.82□□□□□ -1.32
TRAF4-213ENST00000578917 A0A0A0MRY4 1105 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 GOLGA6L7A0A1B0GV03 622 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ANKRD62A6NC57 917 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 PRR23AA6NEV1 266 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 M0QYT0 321 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 IRAK2O43187 625 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 HRO43593 1189 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 TIMM44O43615 452 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 CACNG3O60359 315 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ACSL4O60488 711 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 SYNCRIPO60506 623 aaKnown RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 TBL1XO60907 577 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 RPP40O75818 363 aaKnown RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 LATS1O95835 1130 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 F9P00740 461 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 ERBB2P04626 1255 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 FYNP06241 537 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 TPM3P06753 285 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 MMEP08473 750 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 NTSR1P30989 418 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 HOXA6P31267 233 aa6.81□□□□□ -1.32
TRAF4-213ENST00000578917 HOXD11P31277 338 aaPredicted RBP6.81□□□□□ -1.32
TRAF4-213ENST00000578917 CCR1P32246 355 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms