RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 DNMT3LQ9UJW3 386 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 FZD10Q9ULW2 581 aa13.95□□□□□ -0.18
SRSF1-202ENST00000578430 HBS1LQ9Y450 684 aaKnown RBP13.95□□□□□ -0.18
SRSF1-202ENST00000578430 SPTBN5Q9NRC6 3674 aaKnown RBP13.94□□□□□ -0.18
SRSF1-202ENST00000578430 LRRD1A4D1F6 860 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 RIOK3O14730 519 aaKnown RBP13.94□□□□□ -0.18
SRSF1-202ENST00000578430 CSPG5O95196 566 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 FGGP02679 453 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 EPCAMP16422 314 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 PTPN2P17706 415 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 ARSEP51690 589 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 EPHA5P54756 1037 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 RING1Q06587 406 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 ZNF211Q13398 564 aaPredicted RBP13.94□□□□□ -0.18
SRSF1-202ENST00000578430 KRT81Q14533 505 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 TRIP4Q15650 581 aaPredicted RBP13.94□□□□□ -0.18
SRSF1-202ENST00000578430 LONRF2Q1L5Z9 754 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 SMTNL2Q2TAL5 461 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 ATP13A4Q4VNC1 1196 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 RAB6CQ53S08 254 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 TFDP3Q5H9I0 405 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 SPOCD1Q6ZMY3 1216 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 SLC13A5Q86YT5 568 aaPredicted RBP13.94□□□□□ -0.18
SRSF1-202ENST00000578430 CCDC50Q8IVM0 306 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 ADAM32Q8TC27 787 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 RAPGEF5Q92565 580 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 HSPH1Q92598 858 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 MRPS31Q92665 395 aaKnown RBP13.94□□□□□ -0.18
SRSF1-202ENST00000578430 RNF34Q969K3 372 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 MS4A14Q96JA4 679 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 HAPLN3Q96S86 360 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 ZNF670Q9BS34 389 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 CARD6Q9BX69 1037 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 LRRC3Q9BY71 257 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 OSBPL8Q9BZF1 889 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 RAB6CQ9H0N0 254 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 IL21Q9HBE4 155 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 ASAH2Q9NR71 780 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.94□□□□□ -0.18
SRSF1-202ENST00000578430 ARHGEF38Q9NXL2 777 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 MARCH2Q9P0N8 246 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 CALCOCO1Q9P1Z2 691 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 SLC12A6Q9UHW9 1150 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 ZMYM5Q9UJ78 669 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 AP4E1Q9UPM8 1137 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 HCFC2Q9Y5Z7 792 aa13.94□□□□□ -0.18
SRSF1-202ENST00000578430 SYNJ2BP-COX16A0A087WUM0 186 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 GOLGA6L10A0A0M3HER8 536 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 EPOPA6NHQ4 379 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 C3orf70A6NLC5 250 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-202ENST00000578430 CCDC188H7C350 402 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 TJP3O95049 919 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 SRGAP2BP0DMP2 458 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 DDX6P26196 483 aaKnown RBP eCLIP13.93□□□□□ -0.18
SRSF1-202ENST00000578430 HTR7P34969 479 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 CDKN2BP42772 138 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 ATXN1P54253 815 aaKnown RBP13.93□□□□□ -0.18
SRSF1-202ENST00000578430 CDH6P55285 790 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 TBX4P57082 545 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 COG7P83436 770 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 EFEMP1Q12805 493 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 TFDP2Q14188 446 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 KCNT1Q5JUK3 1230 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 MFSD7Q6UXD7 560 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 ADGRD2Q7Z7M1 963 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 TMC8Q8IU68 726 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 CCDC185Q8N715 623 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 RNF25Q96BH1 459 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-202ENST00000578430 SLC39A13Q96H72 371 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 PRKD2Q9BZL6 878 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 OSBPL2Q9H1P3 480 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 TTYH1Q9H313 450 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-202ENST00000578430 ZNF576Q9H609 170 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 NSUN3Q9H649 340 aaKnown RBP13.93□□□□□ -0.18
SRSF1-202ENST00000578430 PCDH18Q9HCL0 1135 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 ZNF334Q9HCZ1 680 aaPredicted RBP13.93□□□□□ -0.18
SRSF1-202ENST00000578430 HOMER3Q9NSC5 361 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 COX16Q9P0S2 106 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 SFMBT1Q9UHJ3 866 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 TRANK1O15050 2925 aa13.93□□□□□ -0.18
SRSF1-202ENST00000578430 CLUHO75153 1309 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 hCG_1818297A0A087WSY0 165 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 PI4K2BG5E9Z4 385 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 H3BRJ5 948 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 PDE2AO00408 941 aaPredicted RBP13.92□□□□□ -0.18
SRSF1-202ENST00000578430 PER2O15055 1255 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 CCL16O15467 120 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 TADA3O75528 432 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 OAS1P00973 400 aaKnown RBP13.92□□□□□ -0.18
SRSF1-202ENST00000578430 IGLV3-27P01718 113 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 APOEP02649 317 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 GABRR2P28476 465 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 L1CAMP32004 1257 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 ARL4AP40617 200 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 NRIP1P48552 1158 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 NUGGCQ68CJ6 796 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 TMEM150AQ86TG1 271 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 UNC45BQ8IWX7 931 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 ATP6V0D2Q8N8Y2 350 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 SPATA4Q8NEY3 305 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms