RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 PES1O00541 588 aaKnown RBP16.8■□□□□ 0.28
VAPA-204ENST00000577901 TPM2P07951 284 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 ZDHHC11BP0C7U3 371 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 IRF1P10914 325 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 ITPKAP23677 461 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 GOLGA7BQ2TAP0 167 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 ANO4Q32M45 955 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 C10orf76Q5T2E6 689 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 PEAR1Q5VY43 1037 aaPredicted RBP16.8■□□□□ 0.28
VAPA-204ENST00000577901 SLC23A3Q6PIS1 610 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 NUDT18Q6ZVK8 323 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 TERB1Q8NA31 727 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 RBBP8NLQ8NC74 664 aaPredicted RBP16.8■□□□□ 0.28
VAPA-204ENST00000577901 WBP2Q969T9 261 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 SLC32A1Q9H598 525 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 TLR8Q9NR97 1041 aaKnown RBP16.8■□□□□ 0.28
VAPA-204ENST00000577901 TSPAN16Q9UKR8 245 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 SCML2Q9UQR0 700 aa16.8■□□□□ 0.28
VAPA-204ENST00000577901 RNF225M0QZC1 329 aaPredicted RBP16.79■□□□□ 0.28
VAPA-204ENST00000577901 AP5Z1O43299 807 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
VAPA-204ENST00000577901 CFIP05156 583 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 KRT5P13647 590 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 HOXB2P14652 356 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 GABRG2P18507 467 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 PON1P27169 355 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 HOXD12P35452 270 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 BCAT1P54687 386 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 TYRO3Q06418 890 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 STILQ15468 1287 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 SLC36A4Q6YBV0 504 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 C11orf57Q6ZUT1 292 aaPredicted RBP16.79■□□□□ 0.28
VAPA-204ENST00000577901 ANKRD20A12PQ8NF67 263 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 KREMEN1Q96MU8 473 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 SCNM1Q9BWG6 230 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 TMEM121BQ9BXQ6 578 aaPredicted RBP16.79■□□□□ 0.28
VAPA-204ENST00000577901 FANCLQ9NW38 375 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 APEX2Q9UBZ4 518 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 STARD13Q9Y3M8 1113 aa16.79■□□□□ 0.28
VAPA-204ENST00000577901 TNRC6BQ9UPQ9 1833 aaKnown RBP16.78■□□□□ 0.28
VAPA-204ENST00000577901 O00370 1275 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 TRIM24O15164 1050 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 TLR5O60602 858 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 NTSR1P30989 418 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 WASP42768 502 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 PGFP49763 221 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 PSEN1P49768 467 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 KIF11P52732 1056 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 MYL5Q02045 173 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 RPL6Q02878 288 aaKnown RBP16.78■□□□□ 0.28
VAPA-204ENST00000577901 BST2Q10589 180 aaKnown RBP16.78■□□□□ 0.28
VAPA-204ENST00000577901 CNGA2Q16280 664 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 KLHL40Q2TBA0 621 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 MIIPQ5JXC2 388 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 GRAMD4Q6IC98 578 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 LCLAT1Q6UWP7 414 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 GPRIN1Q7Z2K8 1008 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 PIGZQ86VD9 579 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 DEFB119Q8N690 84 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 CEP76Q8TAP6 659 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 FSCN3Q9NQT6 498 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 CALCOCO1Q9P1Z2 691 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 HCN2Q9UL51 889 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 SLC6A14Q9UN76 642 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 CNTN6Q9UQ52 1028 aa16.78■□□□□ 0.28
VAPA-204ENST00000577901 MYH10P35580 1976 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 A0A1W2PQF6 199 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 TMEM8BA6NDV4 472 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 XPO1O14980 1071 aaKnown RBP16.77■□□□□ 0.28
VAPA-204ENST00000577901 ZBTB24O43167 697 aaPredicted RBP16.77■□□□□ 0.28
VAPA-204ENST00000577901 SETSIPP0DME0 302 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 ZNF132P52740 706 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 ATXN3P54252 364 aaPredicted RBP16.77■□□□□ 0.28
VAPA-204ENST00000577901 PDE4CQ08493 712 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 SEMA3BQ13214 749 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 DUOXA1Q1HG43 343 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 CDKAL1Q5VV42 579 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 EGFLAMQ63HQ2 1017 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 SMYD5Q6GMV2 418 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 KIAA1211LQ6NV74 962 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 HTR3DQ70Z44 454 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 CCDC186Q7Z3E2 898 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 MIB1Q86YT6 1006 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 HDDC3Q8N4P3 179 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 UBA3Q8TBC4 463 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 TFAP2BQ92481 460 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 GATA6Q92908 595 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 GTPBP2Q9BX10 602 aaKnown RBP16.77■□□□□ 0.28
VAPA-204ENST00000577901 LRRC4Q9HBW1 653 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 DNAJC17Q9NVM6 304 aaKnown RBP16.77■□□□□ 0.28
VAPA-204ENST00000577901 TAB2Q9NYJ8 693 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 USP3Q9Y6I4 520 aa16.77■□□□□ 0.28
VAPA-204ENST00000577901 AKAP13Q12802 2813 aa16.77■□□□□ 0.27
VAPA-204ENST00000577901 SPAARA0A1B0GVQ0 90 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 UPK3BL1B0FP48 263 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 UPK3BL2E5RIL1 263 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 NEDD8-MDP1E9PL57 170 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 CYP26A1O43174 497 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 MED7O43513 233 aa16.76■□□□□ 0.27
VAPA-204ENST00000577901 GREM1O60565 184 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms