RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 OXTRP30559 389 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 DNM1Q05193 864 aaKnown RBP12.39□□□□□ -0.43
CDH8-202ENST00000577228 PPP3CAQ08209 521 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 ENPP2Q13822 863 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 E2F5Q15329 346 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 ZNF394Q53GI3 561 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 PPP1R26Q5T8A7 1209 aaPredicted RBP12.39□□□□□ -0.43
CDH8-202ENST00000577228 LRSAM1Q6UWE0 723 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 INTS8Q75QN2 995 aaKnown RBP12.39□□□□□ -0.43
CDH8-202ENST00000577228 RSRC2Q7L4I2 434 aaKnown RBP12.39□□□□□ -0.43
CDH8-202ENST00000577228 ANKS1BQ7Z6G8 1248 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 ARHGAP18Q8N392 663 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 ZCCHC9Q8N567 271 aaKnown RBP12.39□□□□□ -0.43
CDH8-202ENST00000577228 CADM4Q8NFZ8 388 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 ADAMTS14Q8WXS8 1223 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 DNASE2BQ8WZ79 361 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 SIPA1Q96FS4 1042 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 MKRN2Q9H000 416 aaKnown RBP12.39□□□□□ -0.43
CDH8-202ENST00000577228 MMRN2Q9H8L6 949 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 ITM2CQ9NQX7 267 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 USP25Q9UHP3 1055 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 AGO1Q9UL18 857 aaKnown RBP12.39□□□□□ -0.43
CDH8-202ENST00000577228 STRIP2Q9ULQ0 834 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 ZZEF1O43149 2961 aa12.39□□□□□ -0.43
CDH8-202ENST00000577228 MYL1P05976 194 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 PFKFB1P16118 471 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 TPMTP51580 245 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 ZNF234Q14588 700 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 EIF4HQ15056 248 aaKnown RBP12.38□□□□□ -0.43
CDH8-202ENST00000577228 NFIL3Q16649 462 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 DCAF12L1Q5VU92 463 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 PROSER1Q86XN7 944 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 CACUL1Q86Y37 369 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 TMPRSS6Q8IU80 811 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 DENND1CQ8IV53 801 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 FAM186BQ8IYM0 893 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 PNPLA1Q8N8W4 532 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 PRCCQ92733 491 aaPredicted RBP12.38□□□□□ -0.43
CDH8-202ENST00000577228 SNX21Q969T3 373 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 CCDC47Q96A33 483 aaKnown RBP12.38□□□□□ -0.43
CDH8-202ENST00000577228 PIWIL1Q96J94 861 aaKnown RBP12.38□□□□□ -0.43
CDH8-202ENST00000577228 HEXIM2Q96MH2 286 aaKnown RBP12.38□□□□□ -0.43
CDH8-202ENST00000577228 CIPCQ9C0C6 399 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 TMEM8AQ9HCN3 771 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 ELOVL2Q9NXB9 296 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 MARCH2Q9P0N8 246 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 RCOR1Q9UKL0 485 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 APOBEC2Q9Y235 224 aaKnown RBP12.38□□□□□ -0.43
CDH8-202ENST00000577228 BAHCC1Q9P281 2608 aa12.38□□□□□ -0.43
CDH8-202ENST00000577228 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 SLC12A8A0AV02 714 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 METTL12A8MUP2 240 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 KCNJ18B7U540 433 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 TAF4O00268 1085 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 BCAT2O15382 392 aaPredicted RBP12.37□□□□□ -0.43
CDH8-202ENST00000577228 CER1O95813 267 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 IGLV3-19P01714 112 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 ACADMP11310 421 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 PRKCHP24723 683 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
CDH8-202ENST00000577228 PSMC2P35998 433 aaKnown RBP12.37□□□□□ -0.43
CDH8-202ENST00000577228 YWHAGP61981 247 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDH8-202ENST00000577228 ARID5AQ03989 594 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 ENPEPQ07075 957 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 SCAPQ12770 1279 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 SERPINA13PQ6UXR4 307 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 HSCBQ8IWL3 235 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 CPXM2Q8N436 756 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 TTC39CQ8N584 583 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 SETD7Q8WTS6 366 aaKnown RBP12.37□□□□□ -0.43
CDH8-202ENST00000577228 DDI1Q8WTU0 396 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 SORCS1Q8WY21 1168 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 SLC2A11Q9BYW1 496 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 PCOLCE2Q9UKZ9 415 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 CLEC4EQ9ULY5 219 aa12.37□□□□□ -0.43
CDH8-202ENST00000577228 CBFA2T3O75081 653 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 RHOBTB3O94955 611 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 EPHX1P07099 455 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 CMA1P23946 247 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 GTF2H1P32780 548 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 MATKP42679 507 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 COPAP53621 1224 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 SLC8A3P57103 927 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 PKP1Q13835 747 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 KRT39Q6A163 491 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 IL27RAQ6UWB1 636 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
CDH8-202ENST00000577228 GLRX5Q86SX6 157 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 FAM124AQ86V42 546 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 PIGZQ86VD9 579 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 RBBP8NLQ8NC74 664 aaPredicted RBP12.36□□□□□ -0.43
CDH8-202ENST00000577228 SNX19Q92543 992 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 PLD4Q96BZ4 506 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 TMEM176AQ96HP8 235 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 GAREM1Q9H706 876 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 IL21RQ9HBE5 538 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 CISHQ9NSE2 258 aa12.36□□□□□ -0.43
CDH8-202ENST00000577228 EIF2B4Q9UI10 523 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms