RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 STKLD1Q8NE28 680 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 SLC7A14Q8TBB6 771 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 GRK7Q8WTQ7 553 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 RAPGEF5Q92565 580 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 C1orf74Q96LT6 269 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 TLE6Q9H808 572 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 FAM204AQ9H8W3 233 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 ZWILCHQ9H900 591 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 PCDH18Q9HCL0 1135 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 PIGVQ9NUD9 493 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.93□□□□□ -0.34
TSEN54-204ENST00000577197 DONSONQ9NYP3 566 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.93□□□□□ -0.34
TSEN54-204ENST00000577197 AP4E1Q9UPM8 1137 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 SLC27A5Q9Y2P5 690 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 RAD54BQ9Y620 910 aa12.93□□□□□ -0.34
TSEN54-204ENST00000577197 TGM5O43548 720 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 CLASP2O75122 1294 aaKnown RBP12.92□□□□□ -0.34
TSEN54-204ENST00000577197 CSPG5O95196 566 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 IGLV3-27P01718 113 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 L1CAMP32004 1257 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 ARL4AP40617 200 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 NR2C2P49116 596 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 GPR15P49685 360 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 CLCN4P51793 760 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 CDH6P55285 790 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 USP46P62068 366 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 KRT81Q14533 505 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 TRIP4Q15650 581 aaPredicted RBP12.92□□□□□ -0.34
TSEN54-204ENST00000577197 DUSP6Q16828 381 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 TEX35Q5T0J7 233 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 ZFYVE27Q5T4F4 411 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 DAB2IPQ5VWQ8 1189 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 SLC9A4Q6AI14 798 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 TXNRD3NBQ6F5E7 133 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 BZW1Q7L1Q6 419 aaKnown RBP12.92□□□□□ -0.34
TSEN54-204ENST00000577197 ADGRD2Q7Z7M1 963 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 TAC4Q86UU9 113 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 NOA1Q8NC60 698 aaKnown RBP12.92□□□□□ -0.34
TSEN54-204ENST00000577197 CCHCR1Q8TD31 782 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 SEC14L1Q92503 715 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 NDRG1Q92597 394 aaKnown RBP12.92□□□□□ -0.34
TSEN54-204ENST00000577197 NKD2Q969F2 451 aaPredicted RBP12.92□□□□□ -0.34
TSEN54-204ENST00000577197 AZIN2Q96A70 460 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 SLC39A13Q96H72 371 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 RNF157Q96PX1 679 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 ADAM33Q9BZ11 813 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 WDCPQ9H6R7 721 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 NMUR1Q9HB89 426 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 MTMR10Q9NXD2 777 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 TRPM5Q9NZQ8 1165 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 GMIPQ9P107 970 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 PCSK1NQ9UHG2 260 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 RAB21Q9UL25 225 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 DRG1Q9Y295 367 aaKnown RBP12.92□□□□□ -0.34
TSEN54-204ENST00000577197 MTCH2Q9Y6C9 303 aa12.92□□□□□ -0.34
TSEN54-204ENST00000577197 ZNF840PA6NDX5 716 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 KCNU1A8MYU2 1149 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 BHMG1C9JSJ3 638 aaPredicted RBP12.91□□□□□ -0.34
TSEN54-204ENST00000577197 H3BRJ5 948 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 NDC80O14777 642 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 LATS1O95835 1130 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 RARGP13631 454 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 TFE3P19532 575 aaPredicted RBP12.91□□□□□ -0.34
TSEN54-204ENST00000577197 IL4RP24394 825 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 HOXC13P31276 330 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 EPHA5P54756 1037 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 DRG2P55039 364 aaKnown RBP12.91□□□□□ -0.34
TSEN54-204ENST00000577197 ADGRE1Q14246 886 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 TAF12Q16514 161 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 SMTNL2Q2TAL5 461 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 ATP13A4Q4VNC1 1196 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 KCNT1Q5JUK3 1230 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 NUGGCQ68CJ6 796 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 SCYL2Q6P3W7 929 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 FAM131BQ86XD5 332 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 ELMOD1Q8N336 334 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 KREMEN2Q8NCW0 462 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 SLC22A17Q8WUG5 538 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 EDEM1Q92611 657 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 RNF25Q96BH1 459 aaPredicted RBP12.91□□□□□ -0.34
TSEN54-204ENST00000577197 MAK16Q9BXY0 300 aaKnown RBP12.91□□□□□ -0.34
TSEN54-204ENST00000577197 DCLK3Q9C098 648 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 RAB17Q9H0T7 212 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 ZDHHC7Q9NXF8 308 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 CALCOCO1Q9P1Z2 691 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 STIM2Q9P246 746 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 SLC12A6Q9UHW9 1150 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 RASAL2Q9UJF2 1139 aa12.91□□□□□ -0.34
TSEN54-204ENST00000577197 CFAP69A5D8W1 941 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 TLR5O60602 858 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 OLFM2O95897 454 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 LRG1P02750 347 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 ITGAVP06756 1048 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 SRGAP2BP0DMP2 458 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 DDX6P26196 483 aaKnown RBP eCLIP12.9□□□□□ -0.34
TSEN54-204ENST00000577197 CDC25CP30307 473 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 GJC1P36383 396 aa12.9□□□□□ -0.34
TSEN54-204ENST00000577197 ATP5C1P36542 298 aaKnown RBP12.9□□□□□ -0.34
TSEN54-204ENST00000577197 COILP38432 576 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms