RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 FRMD3A2A2Y4 597 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 EXTL3O43909 919 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 HUS1O60921 280 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 FGF19O95750 216 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 PDGFRBP09619 1106 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 PAX3P23760 479 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 LMO2P25791 158 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 CASP1P29466 404 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 ABCD1P33897 745 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 ATXN1P54253 815 aaKnown RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 MLLT6P55198 1093 aaPredicted RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 PSMC1P62191 440 aaKnown RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 RBP5P82980 135 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 TSPY1Q01534 308 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 POU5F1Q01860 360 aaKnown RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 CLCQ05315 142 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 SIM2Q14190 667 aaPredicted RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 LRRC32Q14392 662 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 PUM1Q14671 1186 aaKnown RBP eCLIP6.66□□□□□ -1.34
NUP88-212ENST00000576708 STK38Q15208 465 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 SOWAHAQ2M3V2 549 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 ITPRIPL2Q3MIP1 535 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 FSTL4Q6MZW2 842 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 SEZ6L2Q6UXD5 910 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 CCDC73Q6ZRK6 1079 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 RALGPS2Q86X27 583 aaPredicted RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 CBWD2Q8IUF1 395 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 SCN4BQ8IWT1 228 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 ADGRF2Q8IZF7 708 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 CMTM8Q8IZV2 173 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 SPEM1Q8N4L4 309 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 CELF5Q8N6W0 485 aaKnown RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 LINC00301Q8NCQ3 95 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 C2orf15Q8WU43 125 aaKnown RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 DHX58Q96C10 678 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 GCNAQ96QF7 691 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 PKMYT1Q99640 499 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 DPH2Q9BQC3 489 aaPredicted RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 TRPC7Q9HCX4 862 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 OLFML3Q9NRN5 406 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 OBP2AQ9NY56 170 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 NME7Q9Y5B8 376 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 KIF26AQ9ULI4 1882 aaPredicted RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 GPR179Q6PRD1 2367 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 TCHHQ07283 1943 aa6.66□□□□□ -1.34
NUP88-212ENST00000576708 EP300Q09472 2414 aaPredicted RBP6.66□□□□□ -1.34
NUP88-212ENST00000576708 NUP210Q8TEM1 1887 aaPredicted RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 C2orf78A6NCI8 922 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 ANTXRLA6NF34 631 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 UPK3BL1B0FP48 263 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 UPK3BL2E5RIL1 263 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 CLIC2O15247 247 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 STX6O43752 255 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 NOL4O94818 638 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 HTR3BO95264 441 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 LDHAP00338 332 aaKnown RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 CST3P01034 146 aaPredicted RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 EGFP01133 1207 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 TMEM191BP0C7N4 346 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 FSTP19883 344 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 AVPR1AP37288 418 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 PNPLA4P41247 253 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 NASPP49321 788 aaPredicted RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 MYL7Q01449 175 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 SMARCB1Q12824 385 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 RUNX3Q13761 415 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 CCDC6Q16204 474 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 DGKKQ5KSL6 1271 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 RNF43Q68DV7 783 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 SHC4Q6S5L8 630 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 MON1AQ86VX9 555 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 SPATA2LQ8IUW3 424 aaPredicted RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 HID1Q8IV36 788 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 SLITRK4Q8IW52 837 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 NELFCDQ8IXH7 590 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 CCDC65Q8IXS2 484 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 GPD1LQ8N335 351 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 LRRC52Q8N7C0 313 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 ARL14EPQ8N8R7 260 aaPredicted RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 CACTINQ8WUQ7 758 aaKnown RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 KBTBD7Q8WVZ9 684 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 MRPS31Q92665 395 aaKnown RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 HPDLQ96IR7 371 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 PSMG3-AS1Q96PY0 264 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 ACBD6Q9BR61 282 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 MRPL45Q9BRJ2 306 aaKnown RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 IER2Q9BTL4 223 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 FAM126AQ9BYI3 521 aaPredicted RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 BLZF1Q9H2G9 400 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 TMEM206Q9H813 350 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 CRTAC1Q9NQ79 661 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 TDP1Q9NUW8 608 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 INTS13Q9NVM9 706 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 THG1LQ9NWX6 298 aaKnown RBP6.65□□□□□ -1.34
NUP88-212ENST00000576708 GDAP2Q9NXN4 497 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 HSPBP1Q9NZL4 362 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 REV1Q9UBZ9 1251 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 TJP2Q9UDY2 1190 aa6.65□□□□□ -1.34
NUP88-212ENST00000576708 KLHL3Q9UH77 587 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms