RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ASS1P00966 412 aaKnown RBP12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 EPHX1P07099 455 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 PIK3CAP42336 1068 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 ASPAP45381 313 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 ARID5AQ03989 594 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 INCA1Q0VD86 236 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 ZNF234Q14588 700 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 TEAD4Q15561 434 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 FYB2Q5VWT5 728 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 SERPINA13PQ6UXR4 307 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 CCDC186Q7Z3E2 898 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 ENGASEQ8NFI3 743 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 BAHD1Q8TBE0 780 aaPredicted RBP12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 HNRNPLLQ8WVV9 542 aaKnown RBP12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 SNX19Q92543 992 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 ZNF396Q96N95 335 aaPredicted RBP12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 NT5C1AQ9BXI3 368 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 CIPCQ9C0C6 399 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 BLZF1Q9H2G9 400 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 ELOVL2Q9NXB9 296 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 CKAP5Q14008 2032 aa12.23□□□□□ -0.45
CTDNEP1-212ENST00000576613 IKBKBO14920 756 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 POLR2DO15514 142 aaKnown RBP12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 TIMM44O43615 452 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 YEATS4O95619 227 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 KLKB1P03952 638 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 CORO1AP31146 461 aaKnown RBP12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 KIF11P52732 1056 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 COPAP53621 1224 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 DLG4P78352 724 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 SHC4Q6S5L8 630 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 DBX2Q6ZNG2 339 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 CACUL1Q86Y37 369 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 SLC9A9Q8IVB4 645 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 ARHGAP18Q8N392 663 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 TMEM174Q8WUU8 243 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 PIWIL1Q96J94 861 aaKnown RBP12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 LRIG1Q96JA1 1093 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 SLC2A11Q9BYW1 496 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 TOR4AQ9NXH8 423 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 RASAL2Q9UJF2 1139 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 STRIP2Q9ULQ0 834 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 APC2O95996 2303 aa12.22□□□□□ -0.45
CTDNEP1-212ENST00000576613 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 A0A1B0GVT2 93 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 GOLGA8CPA6NN73 597 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 DKK1O94907 266 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 KIF20AO95235 890 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 HLA-DRAP01903 254 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 HMBSP08397 361 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 ATXN1LP0C7T5 689 aaKnown RBP12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 PRKCHP24723 683 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 CASP1P29466 404 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 GRK6P43250 576 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 BNC1Q01954 994 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 EFEMP1Q12805 493 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 INAVAQ3KP66 663 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 SPOPLQ6IQ16 392 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 SV2AQ7L0J3 742 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 RSRC2Q7L4I2 434 aaKnown RBP12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 SCD5Q86SK9 330 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 FAM124AQ86V42 546 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 DENND1CQ8IV53 801 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 CPXM2Q8N436 756 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 C1orf216Q8TAB5 229 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 DDI1Q8WTU0 396 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 P2RY11Q96G91 374 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 TWNKQ96RR1 684 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 BACH2Q9BYV9 841 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 CYP3A43Q9HB55 503 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 DMAC2Q9NW81 257 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 FAM13BQ9NYF5 915 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 AGO1Q9UL18 857 aaKnown RBP12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 FRMD4BQ9Y2L6 1034 aa12.21□□□□□ -0.45
CTDNEP1-212ENST00000576613 TNFSF14O43557 240 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 NR3C1P04150 777 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 AFMP43652 599 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 GRIA4P48058 902 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 CSNK1EP49674 416 aaKnown RBP12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 CAMK2GQ13555 558 aaPredicted RBP12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 CUL4BQ13620 913 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 CEP135Q66GS9 1140 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 CEP57L1Q8IYX8 460 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 CCDC150Q8NCX0 1101 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 OR2T3Q8NH03 318 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 DUSP16Q9BY84 665 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 NIF3L1Q9GZT8 377 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 LHX5Q9H2C1 402 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 FBRSQ9HAH7 460 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 OSGEPQ9NPF4 335 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 EXOC1Q9NV70 894 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 MARCH2Q9P0N8 246 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 SNX11Q9Y5W9 270 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 USP3Q9Y6I4 520 aa12.2□□□□□ -0.46
CTDNEP1-212ENST00000576613 TMEM131Q92545 1883 aa12.19□□□□□ -0.46
CTDNEP1-212ENST00000576613 A0A087WV48 116 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms