RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 STILQ15468 1287 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 PARP6Q2NL67 630 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 DAW1Q8N136 415 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 HTR3CQ8WXA8 447 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 LGMNQ99538 433 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 TBC1D23Q9NUY8 699 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 ETNK2Q9NVF9 386 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 TAS2R1Q9NYW7 299 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 SLC12A4Q9UP95 1085 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 MROH7Q68CQ1 1323 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 TMEM191CA6NGB0 347 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 LACTBL1A8MY62 500 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 E7ENQ6 273 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 ZNF23P17027 643 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 TSPAN8P19075 237 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 EIF4BP23588 611 aaKnown RBP18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 AFDNP55196 1824 aaKnown RBP18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 GAD2Q05329 585 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 TBCCQ15814 346 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 TXNRD3NBQ6F5E7 133 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 SH3TC2Q8TF17 1288 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 DTNBP1Q96EV8 351 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 ZNF560Q96MR9 790 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 SEPHS2Q99611 448 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 EML4Q9HC35 981 aaKnown RBP18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 MRC1P22897 1456 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 PTPN20Q4JDL3 420 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 CPT1BQ92523 772 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 ANKRD27Q96NW4 1050 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 UTP6Q9NYH9 597 aaKnown RBP18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 ERAP1Q9NZ08 941 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 VANGL2Q9ULK5 521 aa18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 DRG1Q9Y295 367 aaKnown RBP18.38■□□□□ 0.53
ATPAF1-214ENST00000576409 MYH15Q9Y2K3 1946 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 IGLV3-22A0A075B6J6 115 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 HBP1O60381 514 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 VAPBO95292 243 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 GP5P40197 560 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 STX5Q13190 355 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 RINLQ6ZS11 566 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 BBS12Q6ZW61 710 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 SHCBP1Q8NEM2 672 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 ARHGEF3Q9NR81 526 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 NDFIP2Q9NV92 336 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 HES2Q9Y543 173 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 ROBO3Q96MS0 1386 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 NR5A2O00482 541 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 ABHD2P08910 425 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 FAM200BP0CF97 657 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 DPEP1P16444 411 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 AKAP5P24588 427 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 ACSBG2Q5FVE4 666 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 LPCAT2Q7L5N7 544 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 WDR55Q9H6Y2 383 aaPredicted RBP18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 ANKRD12Q6UB98 2062 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 WNT10BO00744 389 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 B4GALT5O43286 388 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 MMP8P22894 467 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 FDFT1P37268 417 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 SERPINB8P50452 374 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 ROR2Q01974 943 aaKnown RBP18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 VSIG10LQ86VR7 867 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 HPS6Q86YV9 775 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 OR52K1Q8NGK4 314 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 PAIP1Q9H074 479 aaKnown RBP18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
ATPAF1-214ENST00000576409 ADGRA3Q8IWK6 1321 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 ATP6AP2A0A1C7CYW4 349 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 CAPN8A6NHC0 703 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 SIGLEC16A6NMB1 481 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 KDM1AO60341 852 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 ATP6AP2O75787 350 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 FAM58BPP0C7Q3 252 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 ATICP31939 592 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 PCYT1AP49585 367 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 CSE1LP55060 971 aaKnown RBP18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 GDF10P55107 478 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 DPY19L2Q6NUT2 758 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 L3MBTL3Q96JM7 780 aaPredicted RBP18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 MAGEB5Q9BZ81 275 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 WDCPQ9H6R7 721 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 ASMTLO95671 621 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 STMN1P16949 149 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 SKIV2L2P42285 1042 aaKnown RBP18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 EEF1DP3Q658K8 133 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 NAPEPLDQ6IQ20 393 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 CCDC81Q6ZN84 652 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 CLVS1Q8IUQ0 354 aaPredicted RBP18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 LENG9Q96B70 501 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 ECSITQ9BQ95 431 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 NUDT5Q9UKK9 219 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 PAIP2BQ9ULR5 123 aaKnown RBP18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 SUPT3HB4E1H0 165 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 ITGAVP06756 1048 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 NFICP08651 508 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 SP100P23497 879 aaPredicted RBP18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 ADSSP30520 456 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 GRIK1P39086 918 aa18.36■□□□□ 0.53
ATPAF1-214ENST00000576409 ZNF235Q14590 738 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms