RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 EXOC3O60645 756 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 STC2O76061 302 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 C7P10643 843 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 CCDC130P13994 396 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 HOXD13P35453 343 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 PGFP49763 221 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 C21orf59P57076 290 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 ASIC1P78348 528 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 CLDN10P78369 228 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 PDE4CQ08493 712 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 ZNF234Q14588 700 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 CCDC157Q569K6 752 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 FAM26FQ5R3K3 315 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 CNNM4Q6P4Q7 775 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 DHRS13Q6UX07 377 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 EPM2AIP1Q7L775 607 aaPredicted RBP9.45□□□□□ -0.9
SMG6-218ENST00000575454 ADAT2Q7Z6V5 191 aaKnown RBP9.45□□□□□ -0.9
SMG6-218ENST00000575454 ZNF605Q86T29 641 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 FAM124AQ86V42 546 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 C12orf56Q8IXR9 622 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 ARHGAP18Q8N392 663 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 PIP4K2CQ8TBX8 421 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 GOLGA1Q92805 767 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 PIWIL1Q96J94 861 aaKnown RBP9.45□□□□□ -0.9
SMG6-218ENST00000575454 HNRNPABQ99729 332 aaKnown RBP9.45□□□□□ -0.9
SMG6-218ENST00000575454 ACE2Q9BYF1 805 aaPredicted RBP9.45□□□□□ -0.9
SMG6-218ENST00000575454 BTBD1Q9H0C5 482 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 PRORYQ9H606 182 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 SGK2Q9HBY8 427 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 KBTBD4Q9NVX7 518 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 OSER1Q9NX31 292 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 TFIP11Q9UBB9 837 aaKnown RBP9.45□□□□□ -0.9
SMG6-218ENST00000575454 STRIP2Q9ULQ0 834 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 BTBD3Q9Y2F9 522 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 ASXL3Q9C0F0 2248 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 PIEZO2Q9H5I5 2752 aa9.45□□□□□ -0.9
SMG6-218ENST00000575454 VPS37CA5D8V6 355 aaPredicted RBP9.44□□□□□ -0.9
SMG6-218ENST00000575454 PLK4O00444 970 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 CLIC2O15247 247 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 YKT6O15498 198 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 TSPAN3O60637 253 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 BEST1O76090 585 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 SEMA4FO95754 770 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 DNTTP04053 509 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 EIF2S3P41091 472 aaKnown RBP9.44□□□□□ -0.9
SMG6-218ENST00000575454 CTSKP43235 329 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 KIF11P52732 1056 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 NDST1P52848 882 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 ZNF445P59923 1031 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 RACK1P63244 317 aaKnown RBP9.44□□□□□ -0.9
SMG6-218ENST00000575454 CAMK2GQ13555 558 aaPredicted RBP9.44□□□□□ -0.9
SMG6-218ENST00000575454 SLC39A14Q15043 492 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 TTC31Q49AM3 519 aaPredicted RBP9.44□□□□□ -0.9
SMG6-218ENST00000575454 ERICH6BQ5W0A0 696 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 SCARA5Q6ZMJ2 495 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 CCDC186Q7Z3E2 898 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 MARCH9Q86YJ5 346 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 CPXM2Q8N436 756 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 PDILTQ8N807 584 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 C12orf29Q8N999 325 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 IQUBQ8NA54 791 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 WFIKKN2Q8TEU8 576 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 DDI1Q8WTU0 396 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 HPS3Q969F9 1004 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 NRSN2Q9GZP1 204 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 GZF1Q9H116 711 aaPredicted RBP9.44□□□□□ -0.9
SMG6-218ENST00000575454 C6orf106Q9H6K1 298 aaPredicted RBP9.44□□□□□ -0.9
SMG6-218ENST00000575454 NCKAP1Q9Y2A7 1128 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 AK5Q9Y6K8 562 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 SCN1AP35498 2009 aa9.44□□□□□ -0.9
SMG6-218ENST00000575454 TEX51A0A1B0GUA7 166 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 HHLA1C9JL84 531 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 H0Y8X5 98 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 ENC1O14682 589 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 MDM4O15151 490 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 VILLO15195 856 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 RFPL3O75679 317 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 FSBPO95073 299 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 LDOC1O95751 146 aaPredicted RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 KLKB1P03952 638 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 C4BPAP04003 597 aaKnown RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 PRKCHP24723 683 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 ADORA2BP29275 332 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 CORO1AP31146 461 aaKnown RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 ACSL1P33121 698 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 SEMG2Q02383 582 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 CEBPZQ03701 1054 aaKnown RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 ILKQ13418 452 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 KNOP1Q1ED39 458 aaKnown RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 FNDC3BQ53EP0 1204 aaKnown RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 MPPE1Q53F39 396 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 CLEC20AQ6ZU45 233 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 RSRC2Q7L4I2 434 aaKnown RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 NELFCDQ8IXH7 590 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 ZNF557Q8N988 423 aaPredicted RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 RBBP8NLQ8NC74 664 aaPredicted RBP9.43□□□□□ -0.9
SMG6-218ENST00000575454 PARD3BQ8TEW8 1205 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 TMEM174Q8WUU8 243 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 BIRC7Q96CA5 298 aa9.43□□□□□ -0.9
SMG6-218ENST00000575454 CYFIP2Q96F07 1278 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms