RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 EIF4HQ15056 248 aaKnown RBP10.96□□□□□ -0.65
TVP23B-208ENST00000575261 FUT11Q495W5 492 aa10.96□□□□□ -0.65
TVP23B-208ENST00000575261 WDR45BQ5MNZ6 344 aa10.96□□□□□ -0.65
TVP23B-208ENST00000575261 KRT39Q6A163 491 aa10.96□□□□□ -0.65
TVP23B-208ENST00000575261 RSRC2Q7L4I2 434 aaKnown RBP10.96□□□□□ -0.65
TVP23B-208ENST00000575261 UCMAQ8WVF2 138 aa10.96□□□□□ -0.65
TVP23B-208ENST00000575261 ZCCHC14Q8WYQ9 949 aaKnown RBP10.96□□□□□ -0.65
TVP23B-208ENST00000575261 PRDM16Q9HAZ2 1276 aa10.96□□□□□ -0.65
TVP23B-208ENST00000575261 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
TVP23B-208ENST00000575261 MAPK8IP1Q9UQF2 711 aa10.96□□□□□ -0.65
TVP23B-208ENST00000575261 FAM237AA0A1B0GTK4 181 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 MEI4A8MW99 385 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 WASH3PC4AMC7 463 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 SYNCRIPO60506 623 aaKnown RBP10.95□□□□□ -0.66
TVP23B-208ENST00000575261 HMBSP08397 361 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 IL12RB1P42701 662 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 NDUFA8P51970 172 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 DPYDQ12882 1025 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 SLC14A1Q13336 389 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 ADAM9Q13443 819 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 ENPP2Q13822 863 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 GEN1Q17RS7 908 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 ZNF423Q2M1K9 1284 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 EDRF1Q3B7T1 1238 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 ZCWPW2Q504Y3 356 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 METTL3Q86U44 580 aaKnown RBP10.95□□□□□ -0.66
TVP23B-208ENST00000575261 PIGZQ86VD9 579 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 CPXM2Q8N436 756 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 FBXL13Q8NEE6 735 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 OR2I1PQ8NGU4 316 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 P2RY11Q96G91 374 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 TOE1Q96GM8 510 aaKnown RBP10.95□□□□□ -0.66
TVP23B-208ENST00000575261 HEXIM2Q96MH2 286 aaKnown RBP10.95□□□□□ -0.66
TVP23B-208ENST00000575261 ZDHHC5Q9C0B5 715 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 MKRN2Q9H000 416 aaKnown RBP10.95□□□□□ -0.66
TVP23B-208ENST00000575261 CISHQ9NSE2 258 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 MARCH2Q9P0N8 246 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 USP36Q9P275 1121 aaKnown RBP10.95□□□□□ -0.66
TVP23B-208ENST00000575261 THAP10Q9P2Z0 257 aaPredicted RBP10.95□□□□□ -0.66
TVP23B-208ENST00000575261 KLK13Q9UKR3 277 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 AGO1Q9UL18 857 aaKnown RBP10.95□□□□□ -0.66
TVP23B-208ENST00000575261 MSRB2Q9Y3D2 182 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 NFE2L3Q9Y4A8 694 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 CKAP5Q14008 2032 aa10.95□□□□□ -0.66
TVP23B-208ENST00000575261 LOC400499M0QZD8 3231 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 CELSR3Q9NYQ7 3312 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 A0A1B0GTW7 788 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 STX10O60499 249 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 GJB3O75712 270 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 EPB41P11171 864 aaKnown RBP10.94□□□□□ -0.66
TVP23B-208ENST00000575261 NCAM1P13591 858 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 CD59P13987 128 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 OXTRP30559 389 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 YWHAGP61981 247 aaKnown RBP eCLIP10.94□□□□□ -0.66
TVP23B-208ENST00000575261 GRIK2Q13002 908 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 RAB41Q5JT25 222 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 ARHGAP17Q68EM7 881 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 DENND1CQ8IV53 801 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 SLC4A11Q8NBS3 891 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 SPRYD3Q8NCJ5 442 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 CADM4Q8NFZ8 388 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 DDI1Q8WTU0 396 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 PRCCQ92733 491 aaPredicted RBP10.94□□□□□ -0.66
TVP23B-208ENST00000575261 PLD4Q96BZ4 506 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 SIPA1Q96FS4 1042 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 CCDC34Q96HJ3 373 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 TMEM176AQ96HP8 235 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 ARID3AQ99856 593 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 GPR174Q9BXC1 333 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 SLC2A11Q9BYW1 496 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 UBXN6Q9BZV1 441 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 CIPCQ9C0C6 399 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 RAB20Q9NX57 234 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 WSB2Q9NYS7 404 aaPredicted RBP10.94□□□□□ -0.66
TVP23B-208ENST00000575261 RALYQ9UKM9 306 aaKnown RBP10.94□□□□□ -0.66
TVP23B-208ENST00000575261 ATRXP46100 2492 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 CACNA1GO43497 2377 aa10.94□□□□□ -0.66
TVP23B-208ENST00000575261 SLC12A8A0AV02 714 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 ZBED1O96006 694 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 ACADMP11310 421 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 MAOBP27338 520 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 HARS2P49590 506 aaKnown RBP10.93□□□□□ -0.66
TVP23B-208ENST00000575261 TPMTP51580 245 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 TKTL1P51854 596 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 BCAT1P54687 386 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 RAD23BP54727 409 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 ZNF445P59923 1031 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 FAM193AP78312 1265 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 ARID5AQ03989 594 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 ZNF234Q14588 700 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 SERPINA13PQ6UXR4 307 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 KRBA2Q6ZNG9 492 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 RAB44Q7Z6P3 723 aaPredicted RBP10.93□□□□□ -0.66
TVP23B-208ENST00000575261 CACUL1Q86Y37 369 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 TMPRSS6Q8IU80 811 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 NAXDQ8IW45 347 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 FAM217AQ8IXS0 508 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 ZCCHC9Q8N567 271 aaKnown RBP10.93□□□□□ -0.66
TVP23B-208ENST00000575261 ANKRD52Q8NB46 1076 aa10.93□□□□□ -0.66
TVP23B-208ENST00000575261 DNASE2BQ8WZ79 361 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms