RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 CYBBP04839 570 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 ZNF806P0C7X5 589 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 GPD2P43304 727 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 MFAP3P55082 362 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 FOXK2Q01167 660 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 ARHGAP44Q17R89 818 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 DPCR1Q3MIW9 517 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 DENND1BQ6P3S1 775 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 FRMD1Q8N878 549 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 DDI1Q8WTU0 396 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 ST7Q9NRC1 585 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 CLEC4EQ9ULY5 219 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 PCDHGA5Q9Y5G8 931 aa27.2■■□□□ 1.94
NPLOC4-215ENST00000574095 LTFP02788 710 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 MPLP40238 635 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 CREB5Q02930 508 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 EXOC3L4Q17RC7 722 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 PLA2G2CQ5R387 149 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 PMS2CLQ68D20 193 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 SDE2Q6IQ49 451 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 ENOSF1Q7L5Y1 443 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 SCUBE3Q8IX30 993 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 FAM217AQ8IXS0 508 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 ZNF606Q8WXB4 792 aa27.19■■□□□ 1.94
NPLOC4-215ENST00000574095 A0A1W2PQF6 199 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 TSPAN3O60637 253 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 FBXO21O94952 628 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 USP8P40818 1118 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 GEN1Q17RS7 908 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 MSANTD2Q6P1R3 559 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 C11orf74Q86VG3 221 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 C12orf50Q8NA57 414 aaPredicted RBP27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 NETO1Q8TDF5 533 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 GOLGA1Q92805 767 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 THAP9Q9H5L6 903 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 LMBRD1Q9NUN5 540 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 CACNA2D2Q9NY47 1150 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 APEX2Q9UBZ4 518 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 SLC27A6Q9Y2P4 619 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 RAD54BQ9Y620 910 aa27.18■■□□□ 1.94
NPLOC4-215ENST00000574095 NUP205Q92621 2012 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 BECN2A8MW95 431 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 WASH3PC4AMC7 463 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 THAP12O43422 761 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 MED7O43513 233 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 FOXD2O60548 495 aaPredicted RBP27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 GABRG2P18507 467 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 PON1P27169 355 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 GNA15P30679 374 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 P2RY2P41231 377 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 AASDHQ4L235 1098 aaPredicted RBP27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 HSP90AA4PQ58FG1 418 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 KIAA1211LQ6NV74 962 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 FAM81BQ96LP2 452 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 RTKNQ9BST9 563 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 RXFP3Q9NSD7 469 aa27.17■■□□□ 1.94
NPLOC4-215ENST00000574095 DCDC2BA2VCK2 349 aa27.16■■□□□ 1.94
NPLOC4-215ENST00000574095 RPL34P49207 117 aaKnown RBP27.16■■□□□ 1.94
NPLOC4-215ENST00000574095 MAP7D1Q3KQU3 841 aa27.16■■□□□ 1.94
NPLOC4-215ENST00000574095 MPPE1Q53F39 396 aa27.16■■□□□ 1.94
NPLOC4-215ENST00000574095 CLEC17AQ6ZS10 378 aa27.16■■□□□ 1.94
NPLOC4-215ENST00000574095 IPO4Q8TEX9 1081 aaKnown RBP27.16■■□□□ 1.94
NPLOC4-215ENST00000574095 PIWIL1Q96J94 861 aaKnown RBP27.16■■□□□ 1.94
NPLOC4-215ENST00000574095 GABRG3Q99928 467 aa27.16■■□□□ 1.94
NPLOC4-215ENST00000574095 VPS45Q9NRW7 570 aa27.16■■□□□ 1.94
NPLOC4-215ENST00000574095 BCLAF3A2AJT9 711 aaKnown RBP27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 GTPBP10A4D1E9 387 aaKnown RBP27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 FYNP06241 537 aa27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 NCAM1P13591 858 aa27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 DHPSP49366 369 aaPredicted RBP27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 MAN2A1Q16706 1144 aa27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 SPACA7Q96KW9 195 aa27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 CD248Q9HCU0 757 aa27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 DACH1Q9UI36 760 aa27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 CYTH4Q9UIA0 394 aa27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 MBD1Q9UIS9 605 aaPredicted RBP27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 STOML2Q9UJZ1 356 aa27.15■■□□□ 1.94
NPLOC4-215ENST00000574095 MED19A0JLT2 244 aaPredicted RBP27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 SLC30A4O14863 429 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 MAP3K13O43283 966 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 CAVIN2O95810 425 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 ERCC5P28715 1186 aaPredicted RBP27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 ACADSBP45954 432 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 ADGRF1Q5T601 910 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 TCEAL6Q6IPX3 200 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 FAM114A1Q8IWE2 563 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 STK32AQ8WU08 396 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 TCEAL3Q969E4 200 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 FAM149B1Q96BN6 582 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 TMA16Q96EY4 203 aaKnown RBP27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 SLC4A5Q9BY07 1137 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 SLC2A11Q9BYW1 496 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 SIX2Q9NPC8 291 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 CALCOCO1Q9P1Z2 691 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 AJAP1Q9UKB5 411 aaPredicted RBP27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 NAALADL1Q9UQQ1 740 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 STON1Q9Y6Q2 735 aa27.14■■□□□ 1.94
NPLOC4-215ENST00000574095 PLXND1Q9Y4D7 1925 aa27.14■■□□□ 1.93
NPLOC4-215ENST00000574095 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.13■■□□□ 1.93
NPLOC4-215ENST00000574095 GFRA2O00451 464 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms