RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 EEF2KMTQ96G04 330 aa23.06■■□□□ 1.28
SNF8-216ENST00000573795 TMEM176AQ96HP8 235 aa23.06■■□□□ 1.28
SNF8-216ENST00000573795 CDK5RAP1Q96SZ6 601 aaKnown RBP23.06■■□□□ 1.28
SNF8-216ENST00000573795 USP36Q9P275 1121 aaKnown RBP23.06■■□□□ 1.28
SNF8-216ENST00000573795 KLK13Q9UKR3 277 aa23.06■■□□□ 1.28
SNF8-216ENST00000573795 NEUROG3Q9Y4Z2 214 aa23.06■■□□□ 1.28
SNF8-216ENST00000573795 MUC22E2RYF6 1773 aaPredicted RBP23.06■■□□□ 1.28
SNF8-216ENST00000573795 KCNJ18B7U540 433 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 TULP2O00295 520 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 MAOBP27338 520 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 CHKAP35790 457 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 MXI1P50539 228 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 FAM217AQ8IXS0 508 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 SMYD4Q8IYR2 804 aaPredicted RBP23.05■■□□□ 1.28
SNF8-216ENST00000573795 CCDC150Q8NCX0 1101 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 TATDN2Q93075 761 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 CCDC47Q96A33 483 aaKnown RBP23.05■■□□□ 1.28
SNF8-216ENST00000573795 FAXDC2Q96IV6 333 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 UBXN6Q9BZV1 441 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 DCLK3Q9C098 648 aa23.05■■□□□ 1.28
SNF8-216ENST00000573795 WSB2Q9NYS7 404 aaPredicted RBP23.05■■□□□ 1.28
SNF8-216ENST00000573795 TMEM8BA6NDV4 472 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 NDUFS2O75306 463 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 CD6P30203 668 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 EDRF1Q3B7T1 1238 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 TMEM215Q68D42 235 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 DENND1CQ8IV53 801 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 RGL4Q8IZJ4 473 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 CPXM2Q8N436 756 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 FBXL13Q8NEE6 735 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 NDRG1Q92597 394 aaKnown RBP23.04■■□□□ 1.28
SNF8-216ENST00000573795 TOE1Q96GM8 510 aaKnown RBP23.04■■□□□ 1.28
SNF8-216ENST00000573795 PRDM16Q9HAZ2 1276 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 RAB20Q9NX57 234 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 MARCH2Q9P0N8 246 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 LAMA5O15230 3695 aa23.04■■□□□ 1.28
SNF8-216ENST00000573795 DSPP15924 2871 aaKnown RBP23.03■■□□□ 1.28
SNF8-216ENST00000573795 A0A1W2PQ27 194 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 A0A1W2PQ64 194 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 SYPP08247 313 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 COPAP53621 1224 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 YWHAGP61981 247 aaKnown RBP eCLIP23.03■■□□□ 1.28
SNF8-216ENST00000573795 STARD3Q14849 445 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 PLEKHG6Q3KR16 790 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 PM20D1Q6GTS8 502 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 ANKS1BQ7Z6G8 1248 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 ANKRD52Q8NB46 1076 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 DNASE2BQ8WZ79 361 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 FOXJ1Q92949 421 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 CAMK1GQ96NX5 476 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 FAM124BQ9H5Z6 455 aaPredicted RBP23.03■■□□□ 1.28
SNF8-216ENST00000573795 ITM2CQ9NQX7 267 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 MSRB2Q9Y3D2 182 aa23.03■■□□□ 1.28
SNF8-216ENST00000573795 SLC12A8A0AV02 714 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 NPC1O15118 1278 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 PRKCHP24723 683 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 TKTL1P51854 596 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 ZNF234Q14588 700 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 CBWD6Q4V339 395 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 CBWD3Q5JTY5 395 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 CBWD5Q5RIA9 395 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 ARHGAP18Q8N392 663 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 TTC39CQ8N584 583 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 SORCS1Q8WY21 1168 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 ULBP1Q9BZM6 244 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 DNAI2Q9GZS0 605 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 ELOVL2Q9NXB9 296 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 SUSD2Q9UGT4 822 aa23.02■■□□□ 1.28
SNF8-216ENST00000573795 ZNF202O95125 648 aa23.01■■□□□ 1.27
SNF8-216ENST00000573795 ZNF132P52740 706 aa23.01■■□□□ 1.27
SNF8-216ENST00000573795 GRIK2Q13002 908 aa23.01■■□□□ 1.27
SNF8-216ENST00000573795 TRIP4Q15650 581 aaPredicted RBP23.01■■□□□ 1.27
SNF8-216ENST00000573795 SYCP2LQ5T4T6 812 aa23.01■■□□□ 1.27
SNF8-216ENST00000573795 PLD4Q96BZ4 506 aa23.01■■□□□ 1.27
SNF8-216ENST00000573795 GPR174Q9BXC1 333 aa23.01■■□□□ 1.27
SNF8-216ENST00000573795 FAM221BA6H8Z2 402 aa23■■□□□ 1.27
SNF8-216ENST00000573795 SRRM3A6NNA2 597 aaPredicted RBP23■■□□□ 1.27
SNF8-216ENST00000573795 SH3BP5O60239 455 aa23■■□□□ 1.27
SNF8-216ENST00000573795 ZBED1O96006 694 aa23■■□□□ 1.27
SNF8-216ENST00000573795 IGLV3-19P01714 112 aa23■■□□□ 1.27
SNF8-216ENST00000573795 NCAM1P13591 858 aa23■■□□□ 1.27
SNF8-216ENST00000573795 TPMTP51580 245 aa23■■□□□ 1.27
SNF8-216ENST00000573795 PDE4CQ08493 712 aa23■■□□□ 1.27
SNF8-216ENST00000573795 SLC14A1Q13336 389 aa23■■□□□ 1.27
SNF8-216ENST00000573795 EIF4HQ15056 248 aaKnown RBP23■■□□□ 1.27
SNF8-216ENST00000573795 GOLGA7BQ2TAP0 167 aa23■■□□□ 1.27
SNF8-216ENST00000573795 WDR45BQ5MNZ6 344 aa23■■□□□ 1.27
SNF8-216ENST00000573795 RSRC2Q7L4I2 434 aaKnown RBP23■■□□□ 1.27
SNF8-216ENST00000573795 RAB44Q7Z6P3 723 aaPredicted RBP23■■□□□ 1.27
SNF8-216ENST00000573795 TMPRSS6Q8IU80 811 aa23■■□□□ 1.27
SNF8-216ENST00000573795 CHCHD4Q8N4Q1 142 aa23■■□□□ 1.27
SNF8-216ENST00000573795 UCMAQ8WVF2 138 aa23■■□□□ 1.27
SNF8-216ENST00000573795 ZCCHC14Q8WYQ9 949 aaKnown RBP23■■□□□ 1.27
SNF8-216ENST00000573795 TSPAN16Q9UKR8 245 aa23■■□□□ 1.27
SNF8-216ENST00000573795 STRIP2Q9ULQ0 834 aa23■■□□□ 1.27
SNF8-216ENST00000573795 COQ4Q9Y3A0 265 aa23■■□□□ 1.27
SNF8-216ENST00000573795 NFE2L3Q9Y4A8 694 aa23■■□□□ 1.27
SNF8-216ENST00000573795 NUMA1Q14980 2115 aa23■■□□□ 1.27
SNF8-216ENST00000573795 XPO1O14980 1071 aaKnown RBP22.99■■□□□ 1.27
SNF8-216ENST00000573795 CYBBP04839 570 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms