RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 KCTD16Q68DU8 428 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 RETSATQ6NUM9 610 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 SLC25A41Q8N5S1 370 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 RAPGEF5Q92565 580 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 ATP13A1Q9HD20 1204 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 GDAP2Q9NXN4 497 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 SMCHD1A6NHR9 2005 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 SLC9A3R1O14745 358 aaPredicted RBP10.45□□□□□ -0.74
SMG6-213ENST00000573166 FLT3P36888 993 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 ATP13A4Q4VNC1 1196 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 C16orf59Q7L2K0 433 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 NOA1Q8NC60 698 aaKnown RBP10.45□□□□□ -0.74
SMG6-213ENST00000573166 IGSF21Q96ID5 467 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 SNRNP25Q9BV90 132 aaKnown RBP10.45□□□□□ -0.74
SMG6-213ENST00000573166 TRAIPQ9BWF2 469 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 STRA6Q9BX79 667 aa10.45□□□□□ -0.74
SMG6-213ENST00000573166 AFF4Q9UHB7 1163 aaKnown RBP10.45□□□□□ -0.74
SMG6-213ENST00000573166 MDM4O15151 490 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 RAD51CO43502 376 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 MT-ND3P03897 115 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PRLRP16471 622 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 STX2P32856 288 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 CHKAP35790 457 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PAPD7Q5XG87 772 aaKnown RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 ARHGAP17Q68EM7 881 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 CRYBG2Q8N1P7 616 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PPP4R1Q8TF05 950 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 FAM161BQ96MY7 647 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 XPO6Q96QU8 1125 aaKnown RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 PNKPQ96T60 521 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 TMEM121Q9BTD3 319 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 HAPLN2Q9GZV7 340 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 TMEM51Q9NW97 253 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PCDHGC5Q9Y5F6 944 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PIRO00625 290 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PSMD3O43242 534 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 CASP8Q14790 479 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 C6orf118Q5T5N4 469 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 TIGD7Q6NT04 549 aaPredicted RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 TMC5Q6UXY8 1006 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 MFN1Q8IWA4 741 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PPM1NQ8N819 430 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 GPATCH11Q8N954 259 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 TGS1Q96RS0 853 aaKnown RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 SMC6Q96SB8 1091 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PAAF1Q9BRP4 392 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 SLC25A13Q9UJS0 675 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 NOCTQ9UK39 431 aaKnown RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 TPX2Q9ULW0 747 aaKnown RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 F8W8V4 182 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 MSI1O43347 362 aaKnown RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 HCRTO43612 131 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 DAB1O75553 588 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 FNTAP49354 379 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 RHOAP61586 193 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 KCTD19Q17RG1 926 aaPredicted RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 XYLT1Q86Y38 959 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 POF1BQ8WVV4 589 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 ZNF333Q96JL9 665 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 RBM22Q9NW64 420 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMG6-213ENST00000573166 XPO7Q9UIA9 1087 aaKnown RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 TMEM191CA6NGB0 347 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 H3BQF6 201 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PTGESO14684 152 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 NCAM2O15394 837 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 ANXA9O76027 345 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 ITIH2P19823 946 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PROZP22891 400 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 UPP1Q16831 310 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 LRRC26Q2I0M4 334 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 PLEKHG4Q58EX7 1191 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 TPGS2Q68CL5 300 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 LHX8Q68G74 356 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 B4GALNT4Q76KP1 1039 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 TAS2R42Q7RTR8 314 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 ANKMY2Q8IV38 441 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 LZTR1Q8N653 840 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 SCAMP5Q8TAC9 235 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 CSGALNACT1Q8TDX6 532 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 STK32AQ8WU08 396 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 ERP44Q9BS26 406 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 RHOBTB2Q9BYZ6 727 aa10.44□□□□□ -0.74
SMG6-213ENST00000573166 SUDS3Q9H7L9 328 aaPredicted RBP10.44□□□□□ -0.74
SMG6-213ENST00000573166 KCNK1O00180 336 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 MGEA5O60502 916 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 KDELR1P24390 212 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 ARHGEF7Q14155 803 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 SLC25A52Q3SY17 297 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 UBXN11Q5T124 520 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 MARC1Q5VT66 337 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 SLC26A9Q7LBE3 791 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 OSTM1Q86WC4 334 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 ZC3H3Q8IXZ2 948 aaKnown RBP10.43□□□□□ -0.74
SMG6-213ENST00000573166 ATP11CQ8NB49 1132 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 KLHL23Q8NBE8 558 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 BORCS6Q96GS4 357 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 RBM15Q96T37 977 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMG6-213ENST00000573166 NT5MQ9NPB1 228 aa10.43□□□□□ -0.74
SMG6-213ENST00000573166 TRDMT1O14717 391 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms