RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 NIF3L1Q9GZT8 377 aa10.36□□□□□ -0.75
TRAPPC1-205ENST00000572656 MIR1-1HGQ9H1L0 117 aa10.36□□□□□ -0.75
TRAPPC1-205ENST00000572656 ELOVL2Q9NXB9 296 aa10.36□□□□□ -0.75
TRAPPC1-205ENST00000572656 KIAA1522Q9P206 1035 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC1-205ENST00000572656 PCOLCE2Q9UKZ9 415 aa10.36□□□□□ -0.75
TRAPPC1-205ENST00000572656 AGO1Q9UL18 857 aaKnown RBP10.36□□□□□ -0.75
TRAPPC1-205ENST00000572656 TRAF3IP3Q9Y228 551 aa10.36□□□□□ -0.75
TRAPPC1-205ENST00000572656 WDFY3Q8IZQ1 3526 aa10.36□□□□□ -0.75
TRAPPC1-205ENST00000572656 ITPR1Q14643 2758 aa10.36□□□□□ -0.75
TRAPPC1-205ENST00000572656 PCDH15Q96QU1 1955 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 DMXL2Q8TDJ6 3036 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 DSPP15924 2871 aaKnown RBP10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 BCAT2O15382 392 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 TIMM44O43615 452 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 KIF20AO95235 890 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 CER1O95813 267 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 CYBBP04839 570 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 HMBSP08397 361 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 ZNF883P0CG24 379 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 ZSCAN22P10073 491 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 ACADMP11310 421 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 GCLMP48507 274 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 COPAP53621 1224 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 ENPEPQ07075 957 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 EFEMP1Q12805 493 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 ZNF234Q14588 700 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 EIF4HQ15056 248 aaKnown RBP10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 PPP1R26Q5T8A7 1209 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 IL27RAQ6UWB1 636 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 INTS8Q75QN2 995 aaKnown RBP10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 SLCO6A1Q86UG4 719 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 ARHGAP18Q8N392 663 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 CPXM2Q8N436 756 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 RBBP8NLQ8NC74 664 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 CCDC150Q8NCX0 1101 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 TAS1R2Q8TE23 839 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 SETD7Q8WTS6 366 aaKnown RBP10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 SLC2A11Q9BYW1 496 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 UBXN6Q9BZV1 441 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 CCDC86Q9H6F5 360 aaKnown RBP10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 GAREM1Q9H706 876 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 IL21RQ9HBE5 538 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 RASAL2Q9UJF2 1139 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 STRIP2Q9ULQ0 834 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 GPSM3Q9Y4H4 160 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 PLXND1Q9Y4D7 1925 aa10.35□□□□□ -0.75
TRAPPC1-205ENST00000572656 F13A1P00488 732 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 MYL1P05976 194 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 TRIM49P0CI25 452 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 TRIM49CP0CI26 452 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 KRT13P13646 458 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 PRKCHP24723 683 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 MATKP42679 507 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 BNC1Q01954 994 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 PPP3CAQ08209 521 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 NFIL3Q16649 462 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 HLA-BQ31612 363 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 DBX2Q6ZNG2 339 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 RSRC2Q7L4I2 434 aaKnown RBP10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 DENND1CQ8IV53 801 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 FAM217AQ8IXS0 508 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 TTC39CQ8N584 583 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 C1orf216Q8TAB5 229 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 DDI1Q8WTU0 396 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 FAXDC2Q96IV6 333 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 HEXIM2Q96MH2 286 aaKnown RBP10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 CIPCQ9C0C6 399 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 PCED1AQ9H1Q7 454 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 TM7SF3Q9NS93 570 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 MARCH2Q9P0N8 246 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 USP25Q9UHP3 1055 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 EIF2B4Q9UI10 523 aaKnown RBP10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 RCOR1Q9UKL0 485 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 CFAP45Q9UL16 551 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 CLEC4EQ9ULY5 219 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 PCDHGB2Q9Y5G2 931 aa10.34□□□□□ -0.75
TRAPPC1-205ENST00000572656 ASCC3Q8N3C0 2202 aaKnown RBP10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 BAHCC1Q9P281 2608 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 SLC12A8A0AV02 714 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 EPHX1P07099 455 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 NR2F2P24468 414 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 PSMC2P35998 433 aaKnown RBP10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 YWHAGP61981 247 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 ARID5AQ03989 594 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 SUZ12Q15022 739 aaKnown RBP10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 ZNF394Q53GI3 561 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 RAB41Q5JT25 222 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 TMEM215Q68D42 235 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 C19orf48Q6RUI8 117 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 SERPINA13PQ6UXR4 307 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 FAM186BQ8IYM0 893 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 OR2T3Q8NH03 318 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 BAHD1Q8TBE0 780 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 RHBDD1Q8TEB9 315 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 SORCS1Q8WY21 1168 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 PLD4Q96BZ4 506 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 TMEM176AQ96HP8 235 aa10.33□□□□□ -0.76
TRAPPC1-205ENST00000572656 CDC6Q99741 560 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms