RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 OLA1Q9NTK5 396 aaKnown RBP16.3■□□□□ 0.2
TSR1-202ENST00000571806 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
TSR1-202ENST00000571806 USP36Q9P275 1121 aaKnown RBP16.3■□□□□ 0.2
TSR1-202ENST00000571806 RASAL2Q9UJF2 1139 aa16.3■□□□□ 0.2
TSR1-202ENST00000571806 RAD54BQ9Y620 910 aa16.3■□□□□ 0.2
TSR1-202ENST00000571806 ASCC3Q8N3C0 2202 aaKnown RBP16.3■□□□□ 0.2
TSR1-202ENST00000571806 PCDH15Q96QU1 1955 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 WASH3PC4AMC7 463 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 CD59P13987 128 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 NDUFA8P51970 172 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 FUT11Q495W5 492 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 ZNF394Q53GI3 561 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 KRBA2Q6ZNG9 492 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 ANKS1BQ7Z6G8 1248 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 PRCCQ92733 491 aaPredicted RBP16.29■□□□□ 0.2
TSR1-202ENST00000571806 MMRN2Q9H8L6 949 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 ELOVL2Q9NXB9 296 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 WSB2Q9NYS7 404 aaPredicted RBP16.29■□□□□ 0.2
TSR1-202ENST00000571806 MARCH2Q9P0N8 246 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 AGO1Q9UL18 857 aaKnown RBP16.29■□□□□ 0.2
TSR1-202ENST00000571806 MAPK8IP1Q9UQF2 711 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 PCDHB9Q9Y5E1 797 aa16.29■□□□□ 0.2
TSR1-202ENST00000571806 FRYQ5TBA9 3013 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 A0A1B0GTW7 788 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 SPAARA0A1B0GVQ0 90 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 CETN3O15182 167 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 HYAL3O43820 417 aaPredicted RBP16.28■□□□□ 0.2
TSR1-202ENST00000571806 TOP3BO95985 862 aaKnown RBP16.28■□□□□ 0.2
TSR1-202ENST00000571806 EPB41P11171 864 aaKnown RBP16.28■□□□□ 0.2
TSR1-202ENST00000571806 ACADMP11310 421 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 HARS2P49590 506 aaKnown RBP16.28■□□□□ 0.2
TSR1-202ENST00000571806 MXI1P50539 228 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 RAD23BP54727 409 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 YWHAGP61981 247 aaKnown RBP eCLIP16.28■□□□□ 0.2
TSR1-202ENST00000571806 ARID5AQ03989 594 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 PDE4CQ08493 712 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 ZCWPW2Q504Y3 356 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 PM20D1Q6GTS8 502 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 PIGZQ86VD9 579 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 TMPRSS6Q8IU80 811 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 DENND1CQ8IV53 801 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 FAM217AQ8IXS0 508 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 SLC4A11Q8NBS3 891 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 DDI1Q8WTU0 396 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 SIPA1Q96FS4 1042 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 TOE1Q96GM8 510 aaKnown RBP16.28■□□□□ 0.2
TSR1-202ENST00000571806 PIWIL1Q96J94 861 aaKnown RBP16.28■□□□□ 0.2
TSR1-202ENST00000571806 NUP58Q9BVL2 599 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 PCED1AQ9H1Q7 454 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 CEP295Q9C0D2 2601 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 ASPMQ8IZT6 3477 aa16.28■□□□□ 0.2
TSR1-202ENST00000571806 ADAMTS9Q9P2N4 1935 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 PCNX2A6NKB5 2137 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 MEI4A8MW99 385 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 GJB3O75712 270 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 ZBED1O96006 694 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 IGLV3-19P01714 112 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 HMBSP08397 361 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 NCAM1P13591 858 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 IL12RB1P42701 662 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
TSR1-202ENST00000571806 TRIP6Q15654 476 aaKnown RBP16.27■□□□□ 0.2
TSR1-202ENST00000571806 GEN1Q17RS7 908 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 MPPE1Q53F39 396 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 IL27RAQ6UWB1 636 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 MKRN2Q9H000 416 aaKnown RBP16.27■□□□□ 0.2
TSR1-202ENST00000571806 SLC6A17Q9H1V8 727 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 FSCN3Q9NQT6 498 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 HESX1Q9UBX0 185 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 KIAA1257Q9ULG3 409 aa16.27■□□□□ 0.2
TSR1-202ENST00000571806 HBS1LQ9Y450 684 aaKnown RBP16.27■□□□□ 0.2
TSR1-202ENST00000571806 SLC12A8A0AV02 714 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 XPO1O14980 1071 aaKnown RBP16.26■□□□□ 0.19
TSR1-202ENST00000571806 LATS1O95835 1130 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 PRR29P0C7W0 189 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 ZNF883P0CG24 379 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 TPMTP51580 245 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 TKTL1P51854 596 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 BCAT1P54687 386 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 ZNF234Q14588 700 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 TRIP4Q15650 581 aaPredicted RBP16.26■□□□□ 0.19
TSR1-202ENST00000571806 RNF139Q8WU17 664 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 ZCCHC14Q8WYQ9 949 aaKnown RBP16.26■□□□□ 0.19
TSR1-202ENST00000571806 SEMA4DQ92854 862 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 GPR174Q9BXC1 333 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 GTPBP4Q9BZE4 634 aaKnown RBP16.26■□□□□ 0.19
TSR1-202ENST00000571806 IRX2Q9BZI1 471 aaPredicted RBP16.26■□□□□ 0.19
TSR1-202ENST00000571806 RMND1Q9NWS8 449 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 PLA2G4CQ9UP65 541 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 COQ4Q9Y3A0 265 aa16.26■□□□□ 0.19
TSR1-202ENST00000571806 GON4LQ3T8J9 2241 aa16.25■□□□□ 0.19
TSR1-202ENST00000571806 SRRM3A6NNA2 597 aaPredicted RBP16.25■□□□□ 0.19
TSR1-202ENST00000571806 METTL12A8MUP2 240 aa16.25■□□□□ 0.19
TSR1-202ENST00000571806 ZNF202O95125 648 aa16.25■□□□□ 0.19
TSR1-202ENST00000571806 CER1O95813 267 aa16.25■□□□□ 0.19
TSR1-202ENST00000571806 GRIK2Q13002 908 aa16.25■□□□□ 0.19
TSR1-202ENST00000571806 SGO2Q562F6 1265 aa16.25■□□□□ 0.19
TSR1-202ENST00000571806 SERPINA13PQ6UXR4 307 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms