RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 PEX10O60683 326 aa17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 GRIA1P42261 906 aa17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 HIC1Q14526 733 aa17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 MAP1SQ66K74 1059 aaPredicted RBP17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 SLC9A4Q6AI14 798 aa17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 CATSPERGQ6ZRH7 1159 aa17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 TRIM50Q86XT4 487 aa17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 POU5F2Q8N7G0 328 aa17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 INO80BQ9C086 356 aaPredicted RBP17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 CDT1Q9H211 546 aa17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 RPF1Q9H9Y2 349 aaKnown RBP17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 CPSF2Q9P2I0 782 aaKnown RBP17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 DNAJC16Q9Y2G8 782 aa17.45■□□□□ 0.38
PCDHB19P-201ENST00000570871 ARHGAP42A6NI28 874 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 ACKR2O00590 384 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 FKBP6O75344 327 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 VDRP11473 427 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 SERPINB9P50453 376 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 RPL10AP62906 217 aaKnown RBP17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 TEDDM1Q5T9Z0 273 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 MBLAC2Q68D91 279 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 SMYD5Q6GMV2 418 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 UNC5BQ8IZJ1 945 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 PYDC1Q8WXC3 89 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 C12orf42Q96LP6 360 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 S100A14Q9HCY8 104 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 PICK1Q9NRD5 415 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 PCDHA11Q9Y5I1 949 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 LOC285556D6RIA3 1793 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 LACTBL1A8MY62 500 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 ZBTB42B2RXF5 422 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 RNASEH1O60930 286 aaKnown RBP17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 BOLA3Q53S33 107 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 RALGPS1Q5JS13 557 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 EFHC1Q5JVL4 640 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 RABGAP1LQ5R372 815 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 WDR75Q8IWA0 830 aaKnown RBP17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 CCDC33Q8N5R6 958 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 PIWIL2Q8TC59 973 aaKnown RBP17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 SEPT1Q8WYJ6 367 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 NLRP4Q96MN2 994 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 WRNIP1Q96S55 665 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 SNRNP25Q9BV90 132 aaKnown RBP17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 EBF3Q9H4W6 596 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 SLC17A6Q9P2U8 582 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 EMCNQ9ULC0 261 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 SORCS3Q9UPU3 1222 aa17.44■□□□□ 0.38
PCDHB19P-201ENST00000570871 ADORA2AP29274 412 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 RGS7P49802 495 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 PPP6R3Q5H9R7 873 aaPredicted RBP17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 JADE1Q6IE81 842 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 RNF111Q6ZNA4 994 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 TIFABQ6ZNK6 161 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 CXorf38Q8TB03 319 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 FAM172AQ8WUF8 416 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 PPP2R3CQ969Q6 453 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 C2orf40Q9H1Z8 148 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 FZD8Q9H461 694 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 IL18RAPO95256 599 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 FGF3P11487 239 aaPredicted RBP17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 KCNA4P22459 653 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 LRRC36Q1X8D7 754 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 AAGABQ6PD74 315 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 DENND5BQ6ZUT9 1274 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 ADGRG6Q86SQ4 1221 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 MINDY3Q9H8M7 445 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 ADARB2Q9NS39 739 aaKnown RBP17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 MOCS1Q9NZB8 636 aa17.43■□□□□ 0.38
PCDHB19P-201ENST00000570871 ANKRD33BA6NCL7 494 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 SORBS2O94875 1100 aaKnown RBP17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 L1CAMP32004 1257 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 SLC1A6P48664 564 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 LY6KQ17RY6 165 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 N4BP2L1Q5TBK1 243 aaPredicted RBP17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 ATG14Q6ZNE5 492 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 EEPD1Q7L9B9 569 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 DHDDSQ86SQ9 333 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 APOBEC3FQ8IUX4 373 aaKnown RBP17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 TRAPPC12Q8WVT3 735 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 GBA2Q9HCG7 927 aaPredicted RBP17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 TSPAN16Q9UKR8 245 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 APOBEC2Q9Y235 224 aaKnown RBP17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 IGKV6-21A0A0C4DH24 114 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 GPR25O00155 361 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 SIN3BO75182 1162 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 ALDOAP04075 364 aaKnown RBP17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 PFKMP08237 780 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 TPSB2P20231 275 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 NDST1P52848 882 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 EPHB1P54762 984 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 GBE1Q04446 702 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 SLC10A2Q12908 348 aaPredicted RBP17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 HNRNPDQ14103 355 aaKnown RBP17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 TPSAB1Q15661 275 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 MAVSQ7Z434 540 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 CDKL3Q8IVW4 592 aaPredicted RBP17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 OR6Y1Q8NGX8 325 aa17.42■□□□□ 0.38
PCDHB19P-201ENST00000570871 AZIN2Q96A70 460 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms