RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 CYP8B1Q9UNU6 501 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 HBS1LQ9Y450 684 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 RAD54BQ9Y620 910 aa9.34□□□□□ -0.91
NPLOC4-204ENST00000570324 CEP250Q9BV73 2442 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 YJEFN3A6XGL0 299 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 PATE3B3GLJ2 98 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 E7ENQ6 273 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 PIK3R2O00459 728 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 NPC1O15118 1278 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 PMM2O15305 246 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 PENKP01210 267 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 AFPP02771 609 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 CFIP05156 583 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 CISD3P0C7P0 127 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 BRD2P25440 801 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 MFAP3P55082 362 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 ZNF445P59923 1031 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 CNGA2Q16280 664 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 TPD52L1Q16890 204 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 FYB2Q5VWT5 728 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 FOXR2Q6PJQ5 311 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 RABEPKQ7Z6M1 372 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 CCDC117Q8IWD4 279 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 RGL4Q8IZJ4 473 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 CPXM2Q8N436 756 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 TRIML1Q8N9V2 468 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 RBBP8NLQ8NC74 664 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 TMA16Q96EY4 203 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 GABRG3Q99928 467 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 SLC2A11Q9BYW1 496 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 PRDM16Q9HAZ2 1276 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 ST7Q9NRC1 585 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 SFMBT1Q9UHJ3 866 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 MBD1Q9UIS9 605 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 SLC27A6Q9Y2P4 619 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 STON1Q9Y6Q2 735 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 CFAP54Q96N23 3096 aa9.33□□□□□ -0.92
NPLOC4-204ENST00000570324 NUP205Q92621 2012 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 ABCA7Q8IZY2 2146 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 MYO18AQ92614 2054 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 A0A1W2PQF6 199 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 LNP1A1A4G5 178 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 TYW5A2RUC4 315 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 WASH3PC4AMC7 463 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 CAPN9O14815 690 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 SART1O43290 800 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 MED7O43513 233 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 TIMM44O43615 452 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 FBXO21O94952 628 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 KCNK5O95279 499 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 ACADMP11310 421 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 NDUFV2P19404 249 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 ITPKAP23677 461 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 USP8P40818 1118 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 PTGER3P43115 390 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 MAPK8P45983 427 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 SLC11A2P49281 568 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 ZNF132P52740 706 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 DAOAP59103 153 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 IRX4P78413 519 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 GCNT1Q02742 428 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 GFPT1Q06210 699 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 ZNF33AQ06730 810 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 EIF4HQ15056 248 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 TRIP4Q15650 581 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 CAMK4Q16566 473 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 GEN1Q17RS7 908 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 DUOXA1Q1HG43 343 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 SYCP2LQ5T4T6 812 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 ARHGEF19Q8IW93 802 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 TRIM59Q8IWR1 403 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 UNC45BQ8IWX7 931 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 UBR7Q8N806 425 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 CEP76Q8TAP6 659 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 SLC35F5Q8WV83 523 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 IRGQQ8WZA9 623 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 TFAP2BQ92481 460 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 HSFY1Q96LI6 401 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 CNTNAP3BQ96NU0 1288 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 DDX50Q9BQ39 737 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 GTPBP2Q9BX10 602 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 LSM14BQ9BX40 385 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 CNTNAP3Q9BZ76 1288 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 MIS12Q9H081 205 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 INTS2Q9H0H0 1204 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 UBE2TQ9NPD8 197 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 ELOVL2Q9NXB9 296 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 EVLQ9UI08 416 aaPredicted RBP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 FBXO10Q9UK96 956 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 SLC6A14Q9UN76 642 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 PLA2G4CQ9UP65 541 aa9.32□□□□□ -0.92
NPLOC4-204ENST00000570324 ATXN2Q99700 1313 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-204ENST00000570324 IGHV1OR15-9A0A0B4J2B8 117 aa9.31□□□□□ -0.92
NPLOC4-204ENST00000570324 RNF225M0QZC1 329 aaPredicted RBP9.31□□□□□ -0.92
NPLOC4-204ENST00000570324 TM4SF5O14894 197 aa9.31□□□□□ -0.92
NPLOC4-204ENST00000570324 MSI1O43347 362 aaKnown RBP9.31□□□□□ -0.92
NPLOC4-204ENST00000570324 THAP12O43422 761 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms