RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 ACP1P24666 158 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 GNL1P36915 607 aaPredicted RBP19.06■□□□□ 0.64
CLK3-227ENST00000570296 TOB1P50616 345 aaPredicted RBP19.06■□□□□ 0.64
CLK3-227ENST00000570296 ZBTB16Q05516 673 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 CAMK2GQ13555 558 aaPredicted RBP19.06■□□□□ 0.64
CLK3-227ENST00000570296 C6orf132Q5T0Z8 1188 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 KIAA1614Q5VZ46 1190 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 SERPINA13PQ6UXR4 307 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 ANKS1BQ7Z6G8 1248 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 CCDC83Q8IWF9 413 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 HVCN1Q96D96 273 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 SNX25Q9H3E2 840 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 ZHX3Q9H4I2 956 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 PCDHB1Q9Y5F3 818 aa19.06■□□□□ 0.64
CLK3-227ENST00000570296 LDHAP00338 332 aaKnown RBP19.05■□□□□ 0.64
CLK3-227ENST00000570296 IGHV4-34P06331 123 aa19.05■□□□□ 0.64
CLK3-227ENST00000570296 FAM163BP0C2L3 166 aa19.05■□□□□ 0.64
CLK3-227ENST00000570296 SLC5A3P53794 718 aa19.05■□□□□ 0.64
CLK3-227ENST00000570296 SFMBT2Q5VUG0 894 aa19.05■□□□□ 0.64
CLK3-227ENST00000570296 RBBP8NLQ8NC74 664 aaPredicted RBP19.05■□□□□ 0.64
CLK3-227ENST00000570296 MMS19Q96T76 1030 aa19.05■□□□□ 0.64
CLK3-227ENST00000570296 B3GNT5Q9BYG0 378 aa19.05■□□□□ 0.64
CLK3-227ENST00000570296 IKZF4Q9H2S9 585 aa19.05■□□□□ 0.64
CLK3-227ENST00000570296 FBRSQ9HAH7 460 aa19.05■□□□□ 0.64
CLK3-227ENST00000570296 GDF3Q9NR23 364 aa19.05■□□□□ 0.64
CLK3-227ENST00000570296 A0A1W2PPC4 97 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 TACC1O75410 805 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 MPOP05164 745 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 KRT18P05783 430 aaKnown RBP19.04■□□□□ 0.64
CLK3-227ENST00000570296 LSSP48449 732 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 GABREP78334 506 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 KIAA0895LQ68EN5 471 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 XKR5Q6UX68 686 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 Q6ZNB5 142 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 FBXO18Q8NFZ0 1043 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 SAAL1Q96ER3 474 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 P2RY11Q96G91 374 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 ANKRD36BP1Q96IX9 119 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 PIWIL1Q96J94 861 aaKnown RBP19.04■□□□□ 0.64
CLK3-227ENST00000570296 SLC6A18Q96N87 628 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 MRPL45Q9BRJ2 306 aaKnown RBP19.04■□□□□ 0.64
CLK3-227ENST00000570296 PDE11AQ9HCR9 933 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 THSD1Q9NS62 852 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 NME7Q9Y5B8 376 aa19.04■□□□□ 0.64
CLK3-227ENST00000570296 SPTBN1Q01082 2364 aaKnown RBP19.04■□□□□ 0.64
CLK3-227ENST00000570296 ATP8B3O60423 1300 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 CLDN5O00501 218 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 SLC26A4O43511 780 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 TIMM44O43615 452 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 TBX18O95935 607 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 IRX6P78412 446 aaPredicted RBP19.03■□□□□ 0.64
CLK3-227ENST00000570296 TTC31Q49AM3 519 aaPredicted RBP19.03■□□□□ 0.64
CLK3-227ENST00000570296 FYB2Q5VWT5 728 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 ZSWIM2Q8NEG5 633 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 KCNK16Q96T55 309 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 POLR1BQ9H9Y6 1135 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 ASCL3Q9NQ33 180 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 CYLDQ9NQC7 956 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 INTS13Q9NVM9 706 aa19.03■□□□□ 0.64
CLK3-227ENST00000570296 AFPP02771 609 aaKnown RBP19.02■□□□□ 0.64
CLK3-227ENST00000570296 DNTTP04053 509 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 WNT1P04628 370 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 ATP5C1P36542 298 aaKnown RBP19.02■□□□□ 0.64
CLK3-227ENST00000570296 RXRGP48443 463 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 SERINC3Q13530 473 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 PROX2Q3B8N5 592 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 ZNF720Q7Z2F6 126 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 OXR1Q8N573 874 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 EXD3Q8N9H8 876 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 B3GALNT2Q8NCR0 500 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 OR6B3Q8NGW1 331 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 VCPIP1Q96JH7 1222 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 CIPCQ9C0C6 399 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 DPEP3Q9H4B8 488 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 DMAP1Q9NPF5 467 aaPredicted RBP19.02■□□□□ 0.64
CLK3-227ENST00000570296 TLR8Q9NR97 1041 aaKnown RBP19.02■□□□□ 0.64
CLK3-227ENST00000570296 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.02■□□□□ 0.64
CLK3-227ENST00000570296 STARD5Q9NSY2 213 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 EXOC7Q9UPT5 735 aa19.02■□□□□ 0.64
CLK3-227ENST00000570296 PPP1R37O75864 691 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 TNNC2P02585 160 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 GARTP22102 1010 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 CD38P28907 300 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 RPS14P62263 151 aaKnown RBP19.01■□□□□ 0.63
CLK3-227ENST00000570296 ASIC1P78348 528 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 ARID5AQ03989 594 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 ST3GAL1Q11201 340 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 UBAP2LQ14157 1087 aaKnown RBP19.01■□□□□ 0.63
CLK3-227ENST00000570296 DHX8Q14562 1220 aaKnown RBP19.01■□□□□ 0.63
CLK3-227ENST00000570296 CDCP2Q5VXM1 449 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 IGF2-ASQ6U949 168 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 CENPQQ7L2Z9 268 aaPredicted RBP19.01■□□□□ 0.63
CLK3-227ENST00000570296 KANSL1Q7Z3B3 1105 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 SORCS1Q8WY21 1168 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 CCDC97Q96F63 343 aaPredicted RBP19.01■□□□□ 0.63
CLK3-227ENST00000570296 DEPDC7Q96QD5 511 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 ERVMER34-1Q9H9K5 563 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 ZNF510Q9Y2H8 683 aa19.01■□□□□ 0.63
CLK3-227ENST00000570296 NBASA2RRP1 2371 aa19■□□□□ 0.63
CLK3-227ENST00000570296 RELNP78509 3460 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms