RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 PCSK9Q8NBP7 692 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 CSGALNACT1Q8TDX6 532 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TP53INP1Q96A56 240 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 NSUN4Q96CB9 384 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 CCDC120Q96HB5 630 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 ASB2Q96Q27 587 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 UIMC1Q96RL1 719 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TACO1Q9BSH4 297 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 API5Q9BZZ5 524 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 C11orf54Q9H0W9 315 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 SIL1Q9H173 461 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 RNPEPQ9H4A4 650 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 C11orf49Q9H6J7 331 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 ELAC1Q9H777 363 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 NOD2Q9HC29 1040 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 RLIMQ9NVW2 624 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 HAUS2Q9NVX0 235 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 SPATA6Q9NWH7 488 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 NFKBIL1Q9UBC1 381 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 LPAR3Q9UBY5 353 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 GIMAP2Q9UG22 337 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 TBX20Q9UMR3 447 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 PA2G4Q9UQ80 394 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 PLEKHM1Q9Y4G2 1056 aa3.52□□□□□ -1.85
CNOT1-221ENST00000569924 MAGED1Q9Y5V3 778 aaPredicted RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 DDX60LQ5H9U9 1706 aaKnown RBP3.52□□□□□ -1.85
CNOT1-221ENST00000569924 ATAD5Q96QE3 1844 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 A0A0G2JNJ9 132 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 A0A1B0GUL7 405 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 PABPN1LA6NDY0 278 aaKnown RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 GRM6O15303 877 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 P4HA2O15460 535 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 DNPH1O43598 174 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 DKC1O60832 514 aaKnown RBP eCLIP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 SLC43A1O75387 559 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ITGA10O75578 1167 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ALDH1A2O94788 518 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 KLHL18O94889 574 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 UNC5CO95185 931 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 IGLV1-40P01703 118 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 HPXP02790 462 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 DNTTP04053 509 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 GRPP07492 148 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ASNSP08243 561 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 CNPP09543 421 aaKnown RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 SBK3P0C264 359 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 UQCRFS1P1P0C7P4 283 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 MTHFD1P11586 935 aaKnown RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 FOSL1P15407 271 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ACVR2AP27037 513 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 MAPK4P31152 587 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 PTPN7P35236 360 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 HOXD13P35453 343 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 RGS2P41220 211 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 MAGEA10P43363 369 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 GLRBP48167 497 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 BCAT1P54687 386 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ALDH18A1P54886 795 aaKnown RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 UCP3P55916 312 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ERVFRD-1P60508 538 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ARF3P61204 181 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 IRX3P78415 501 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ARF1P84077 181 aaKnown RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ZP2Q05996 745 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 NSUN2Q08J23 767 aaKnown RBP eCLIP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 TFCP2Q12800 502 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 SP140Q13342 867 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 CUL4AQ13619 759 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 RRP1BQ14684 758 aaKnown RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 PSMD6Q15008 389 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 SLC5A9Q2M3M2 681 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 WDR72Q3MJ13 1102 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 LCE2CQ5TA81 110 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 PLAG1Q6DJT9 500 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 FAM109BQ6ICB4 259 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 MRNIPQ6NTE8 343 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ZDHHC24Q6UX98 284 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 RINLQ6ZS11 566 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 TMTC3Q6ZXV5 915 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 B4GALNT4Q76KP1 1039 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 KRT74Q7RTS7 529 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ZNF572Q7Z3I7 529 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ZC3H18Q86VM9 953 aaKnown RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 CHD1LQ86WJ1 897 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 PDSS2Q86YH6 399 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 CREBRFQ8IUR6 639 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 FOXP4Q8IVH2 680 aaPredicted RBP3.51□□□□□ -1.85
CNOT1-221ENST00000569924 CCDC28AQ8IWP9 274 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 TEX11Q8IYF3 940 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 TDHQ8IZJ6 230 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 DEFB123Q8N688 67 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 USP38Q8NB14 1042 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 REPS2Q8NFH8 660 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 GPRC5AQ8NFJ5 357 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 CEP70Q8NHQ1 597 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 SOCS4Q8WXH5 440 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 TRIB2Q92519 343 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 ARHGAP45Q92619 1136 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 USP6NLQ92738 828 aa3.51□□□□□ -1.85
CNOT1-221ENST00000569924 TMEM209Q96SK2 561 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms