RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 TRIM61Q5EBN2 209 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 PSAPL1Q6NUJ1 521 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 LCLAT1Q6UWP7 414 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 RABEPKQ7Z6M1 372 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 PGBD3Q8N328 593 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 CEP76Q8TAP6 659 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 ZNF419Q96HQ0 510 aaPredicted RBP12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 DHTKD1Q96HY7 919 aaPredicted RBP12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 MRGPRX1Q96LB2 322 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 NUSAP1Q9BXS6 441 aaKnown RBP12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 ULBP1Q9BZM6 244 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 CNGB3Q9NQW8 809 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 PLK2Q9NYY3 685 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 MARCH2Q9P0N8 246 aa12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 THAP10Q9P2Z0 257 aaPredicted RBP12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 HOOK1Q9UJC3 728 aaKnown RBP12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 MAP1BP46821 2468 aaKnown RBP12.97□□□□□ -0.33
SCAMP2-212ENST00000569904 SPEGQ15772 3267 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 FRYQ5TBA9 3013 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 GOLGA6L4A6NEF3 574 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 PSMA7O14818 248 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 P4HA2O15460 535 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 ENGP17813 658 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 ITPKAP23677 461 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 WASP42768 502 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 ZNF445P59923 1031 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 RPL6Q02878 288 aaKnown RBP12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 ZNF33AQ06730 810 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 GEN1Q17RS7 908 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 DUOXA1Q1HG43 343 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 GOLGA7BQ2TAP0 167 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 TTI2Q6NXR4 508 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 LMO3Q8TAP4 145 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 SLC35F5Q8WV83 523 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 IRX2Q9BZI1 471 aaPredicted RBP12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 CAPN10Q9HC96 672 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 CACNA2D2Q9NY47 1150 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 USP36Q9P275 1121 aaKnown RBP12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 HESX1Q9UBX0 185 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 HBS1LQ9Y450 684 aaKnown RBP12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 NFE2L3Q9Y4A8 694 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 GTF3C3Q9Y5Q9 886 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 STON1Q9Y6Q2 735 aa12.96□□□□□ -0.33
SCAMP2-212ENST00000569904 CACNA1EQ15878 2313 aa12.96□□□□□ -0.34
SCAMP2-212ENST00000569904 USP24Q9UPU5 2620 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 SLC12A8A0AV02 714 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 YJEFN3A6XGL0 299 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 WASH3PC4AMC7 463 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 E7ENQ6 273 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 GABBR2O75899 941 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 IGLV3-19P01714 112 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 CYBBP04839 570 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 SERPINF2P08697 491 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 BMP6P22004 513 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 IL12RB1P42701 662 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 NOVA1P51513 510 aaKnown RBP12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 MARSP56192 900 aaKnown RBP12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 DAOAP59103 153 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 STIM1Q13586 685 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 BECN1Q14457 450 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 STILQ15468 1287 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 CNGA2Q16280 664 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 FUT11Q495W5 492 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 BSPRYQ5W0U4 402 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 MSANTD2Q6P1R3 559 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 RSRC2Q7L4I2 434 aaKnown RBP12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 ARMCX6Q7L4S7 300 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 ANKS1BQ7Z6G8 1248 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 KIAA0907Q7Z7F0 614 aaPredicted RBP12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 DENND1CQ8IV53 801 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 SLC41A1Q8IVJ1 513 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 IRGQQ8WZA9 623 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 BHMTQ93088 406 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 LRRC4Q9HBW1 653 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 ABCC13Q9NSE7 274 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 MAN1B1Q9UKM7 699 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 CLEC4EQ9ULY5 219 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 SLC6A14Q9UN76 642 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 RAD54BQ9Y620 910 aa12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 NYNRINQ9P2P1 1898 aaKnown RBP12.95□□□□□ -0.34
SCAMP2-212ENST00000569904 PCNX2A6NKB5 2137 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 CACNA1BQ00975 2339 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 GIPC1O14908 333 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 ZBTB24O43167 697 aaPredicted RBP12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 TIMM44O43615 452 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 IGLV3-27P01718 113 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 HMBSP08397 361 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 HOXD9P28356 352 aaPredicted RBP12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 RPL34P49207 117 aaKnown RBP12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 HARS2P49590 506 aaKnown RBP12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 GCNT1Q02742 428 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 ADIGQ0VDE8 80 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 SEMA3BQ13214 749 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 MPPE1Q53F39 396 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 TMEM215Q68D42 235 aa12.94□□□□□ -0.34
SCAMP2-212ENST00000569904 PIP4P1Q86T03 277 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms