RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 M0QYT0 321 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 ATMINO43313 823 aaPredicted RBP16.7■□□□□ 0.26
USB1-215ENST00000569252 CCDC175P0C221 793 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 SLC2A3P11169 496 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 AOC1P19801 751 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 RFC1P35251 1148 aaPredicted RBP16.7■□□□□ 0.26
USB1-215ENST00000569252 HARS2P49590 506 aaKnown RBP16.7■□□□□ 0.26
USB1-215ENST00000569252 SULT1E1P49888 294 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 CLCN5P51795 746 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 TDGQ13569 410 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 SLC25A52Q3SY17 297 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 SYPL2Q5VXT5 272 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 CC2D1AQ6P1N0 951 aaPredicted RBP16.7■□□□□ 0.26
USB1-215ENST00000569252 UNC45BQ8IWX7 931 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 YAF2Q8IY57 180 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 CCDC105Q8IYK2 499 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 DTWD2Q8NBA8 298 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 ASB16Q96NS5 453 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 NCAPGQ9BPX3 1015 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 DDX23Q9BUQ8 820 aaKnown RBP16.7■□□□□ 0.26
USB1-215ENST00000569252 IRF2BPLQ9H1B7 796 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 SMPD4Q9NXE4 827 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 COX16Q9P0S2 106 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 EPS15L1Q9UBC2 864 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 SFMBT1Q9UHJ3 866 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 NENFQ9UMX5 172 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 ARHGAP26Q9UNA1 814 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 HBS1LQ9Y450 684 aaKnown RBP16.7■□□□□ 0.26
USB1-215ENST00000569252 CPQQ9Y646 472 aa16.7■□□□□ 0.26
USB1-215ENST00000569252 CEP250Q9BV73 2442 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 ZNF263O14978 683 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 RNF8O76064 485 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 TRUB2O95900 331 aaKnown RBP16.69■□□□□ 0.26
USB1-215ENST00000569252 FYNP06241 537 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 HMBSP08397 361 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 PSMA2P25787 234 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 VAV2P52735 878 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 ZNF143P52747 638 aaPredicted RBP16.69■□□□□ 0.26
USB1-215ENST00000569252 TBX4P57082 545 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 DEUP1Q05D60 604 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 NME3Q13232 169 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 IFI16Q16666 785 aaKnown RBP16.69■□□□□ 0.26
USB1-215ENST00000569252 FAM78AQ5JUQ0 283 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 MSANTD2Q6P1R3 559 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 EMC1Q8N766 993 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 ACRBPQ8NEB7 543 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 SLC35G2Q8TBE7 412 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 ZNF564Q8TBZ8 553 aaPredicted RBP16.69■□□□□ 0.26
USB1-215ENST00000569252 DQX1Q8TE96 717 aaKnown RBP16.69■□□□□ 0.26
USB1-215ENST00000569252 NXPE3Q969Y0 559 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 TRIM44Q96DX7 344 aaPredicted RBP16.69■□□□□ 0.26
USB1-215ENST00000569252 PIWIL1Q96J94 861 aaKnown RBP16.69■□□□□ 0.26
USB1-215ENST00000569252 ZNF830Q96NB3 372 aaPredicted RBP16.69■□□□□ 0.26
USB1-215ENST00000569252 SLC22A12Q96S37 553 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 PACSIN1Q9BY11 444 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 TSGA10Q9BZW7 698 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 DCLK3Q9C098 648 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 DDIT4Q9NX09 232 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 IP6K2Q9UHH9 426 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 ANAPC7Q9UJX3 599 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 DUSP12Q9UNI6 340 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 ZNF510Q9Y2H8 683 aa16.69■□□□□ 0.26
USB1-215ENST00000569252 GREB1Q4ZG55 1949 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 PATJQ8NI35 1801 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 TMEM191CA6NGB0 347 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 C2CD4BA6NLJ0 364 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 STK25O00506 426 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 MDM4O15151 490 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 GJB6O95452 261 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 OLFM2O95897 454 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 IRF1P10914 325 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 ID4P47928 161 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 RPL7AP62424 266 aaKnown RBP16.68■□□□□ 0.26
USB1-215ENST00000569252 CCZ1BP86790 482 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 CCZ1P86791 482 aaPredicted RBP16.68■□□□□ 0.26
USB1-215ENST00000569252 ATP11AP98196 1134 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 MTA1Q13330 715 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 PIGHQ14442 188 aaPredicted RBP16.68■□□□□ 0.26
USB1-215ENST00000569252 CDO1Q16878 200 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 JOSD2Q8TAC2 188 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 ADAM32Q8TC27 787 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 SH3RF2Q8TEC5 729 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 ELSPBP1Q96BH3 223 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 PLD4Q96BZ4 506 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 ARHGEF26Q96DR7 871 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 CFAP57Q96MR6 1250 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 DESI2Q9BSY9 194 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 CNPY3Q9BT09 278 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 SMG9Q9H0W8 520 aaKnown RBP16.68■□□□□ 0.26
USB1-215ENST00000569252 WDCPQ9H6R7 721 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 TRPV4Q9HBA0 871 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 GKN1Q9NS71 199 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.68■□□□□ 0.26
USB1-215ENST00000569252 OBP2AQ9NY56 170 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 TLR6Q9Y2C9 796 aa16.68■□□□□ 0.26
USB1-215ENST00000569252 MED19A0JLT2 244 aaPredicted RBP16.67■□□□□ 0.26
USB1-215ENST00000569252 LEFTY2O00292 366 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 SLC9A3R1O14745 358 aaPredicted RBP16.67■□□□□ 0.26
USB1-215ENST00000569252 ZSCAN12O43309 604 aa16.67■□□□□ 0.26
USB1-215ENST00000569252 KRT86O43790 486 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms