RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 EIF2S3P41091 472 aaKnown RBP13.11□□□□□ -0.31
SNX29-207ENST00000568949 PSEN1P49768 467 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 CYP2J2P51589 502 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 AP3M2P53677 418 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 BIRC3Q13489 604 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 C10orf120Q5SQS8 335 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 DHRS13Q6UX07 377 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 FAM124AQ86V42 546 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 UNC93AQ86WB7 457 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 RBBP8NLQ8NC74 664 aaPredicted RBP13.11□□□□□ -0.31
SNX29-207ENST00000568949 OR2T3Q8NH03 318 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 SNX19Q92543 992 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 SLC2A11Q9BYW1 496 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 PANK2Q9BZ23 570 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 DCLK3Q9C098 648 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 C6orf106Q9H6K1 298 aaPredicted RBP13.11□□□□□ -0.31
SNX29-207ENST00000568949 TM9SF3Q9HD45 589 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.11□□□□□ -0.31
SNX29-207ENST00000568949 SLCO1B1Q9Y6L6 691 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 UBE4BO95155 1302 aa13.11□□□□□ -0.31
SNX29-207ENST00000568949 A0A1W2PQH9 124 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 HHLA1C9JL84 531 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 H0Y8X5 98 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 PLK4O00444 970 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 MDM4O15151 490 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 CYBBP04839 570 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 EPHX1P07099 455 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 P4HA1P13674 534 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 PLA2G2AP14555 144 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 CLDN10P78369 228 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 COG7P83436 770 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 CAMK2GQ13555 558 aaPredicted RBP13.1□□□□□ -0.31
SNX29-207ENST00000568949 NCOA4Q13772 614 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 CCDC157Q569K6 752 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 C6orf118Q5T5N4 469 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 SERPINA13PQ6UXR4 307 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 SCARA5Q6ZMJ2 495 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 LRRC69Q6ZNQ3 347 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 GPRIN1Q7Z2K8 1008 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 C12orf56Q8IXR9 622 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 CDK5RAP1Q96SZ6 601 aaKnown RBP13.1□□□□□ -0.31
SNX29-207ENST00000568949 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 KBTBD4Q9NVX7 518 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 CLIC5Q9NZA1 410 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 CGNQ9P2M7 1197 aaKnown RBP13.1□□□□□ -0.31
SNX29-207ENST00000568949 FTSJ1Q9UET6 329 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 NUDT5Q9UKK9 219 aa13.1□□□□□ -0.31
SNX29-207ENST00000568949 COL5A1P20908 1838 aaPredicted RBP13.1□□□□□ -0.31
SNX29-207ENST00000568949 ZNF462Q96JM2 2506 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 TSPAN3O60637 253 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 CLSTN1O94985 981 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 C1SP09871 688 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 RALAP11233 206 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 JUPP14923 745 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 TRIM21P19474 475 aaKnown RBP13.09□□□□□ -0.31
SNX29-207ENST00000568949 CD27P26842 260 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 ITPKBP27987 946 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 ACSL1P33121 698 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 HNF1BP35680 557 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 CTSKP43235 329 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 NDST1P52848 882 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 FAM26FQ5R3K3 315 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 CNNM4Q6P4Q7 775 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 CLEC20AQ6ZU45 233 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 CCDC186Q7Z3E2 898 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 ZNF605Q86T29 641 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 CACUL1Q86Y37 369 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 CPXM2Q8N436 756 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 PLEKHO2Q8TD55 490 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 BIRC7Q96CA5 298 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 HNRNPABQ99729 332 aaKnown RBP13.09□□□□□ -0.31
SNX29-207ENST00000568949 CIPCQ9C0C6 399 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 FBRSQ9HAH7 460 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 FAM49BQ9NUQ9 324 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 BPTFQ12830 3046 aa13.09□□□□□ -0.31
SNX29-207ENST00000568949 A0A1B0GTQ1 180 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 VPS37CA5D8V6 355 aaPredicted RBP13.08□□□□□ -0.32
SNX29-207ENST00000568949 KCNK3O14649 394 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 RRP8O43159 456 aaKnown RBP13.08□□□□□ -0.32
SNX29-207ENST00000568949 TLX3O43711 291 aaPredicted RBP13.08□□□□□ -0.32
SNX29-207ENST00000568949 STX6O43752 255 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 EXOC3O60645 756 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 CD2BP2O95400 341 aaKnown RBP13.08□□□□□ -0.32
SNX29-207ENST00000568949 VNN1O95497 513 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 SEMA4FO95754 770 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 C4BPAP04003 597 aaKnown RBP13.08□□□□□ -0.32
SNX29-207ENST00000568949 RPN1P04843 607 aaKnown RBP13.08□□□□□ -0.32
SNX29-207ENST00000568949 ADORA2BP29275 332 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 CORO1AP31146 461 aaKnown RBP13.08□□□□□ -0.32
SNX29-207ENST00000568949 CASP4P49662 377 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 KIF11P52732 1056 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 ASIC1P78348 528 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 AMPD3Q01432 767 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 ARID5AQ03989 594 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 PDE4CQ08493 712 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 RTP5Q14D33 572 aa13.08□□□□□ -0.32
SNX29-207ENST00000568949 SGSM1Q2NKQ1 1148 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms