RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 TMA16Q96EY4 203 aaKnown RBP10.82□□□□□ -0.68
UBR1-207ENST00000568782 SLC2A11Q9BYW1 496 aa10.82□□□□□ -0.68
UBR1-207ENST00000568782 C2orf42Q9NWW7 574 aa10.82□□□□□ -0.68
UBR1-207ENST00000568782 STARD13Q9Y3M8 1113 aa10.82□□□□□ -0.68
UBR1-207ENST00000568782 CEP192Q8TEP8 1941 aa10.82□□□□□ -0.68
UBR1-207ENST00000568782 USP34Q70CQ2 3546 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 IRAK2O43187 625 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 TIMM44O43615 452 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 APOEP02649 317 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 KLKB1P03952 638 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 GPD2P43304 727 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 KIR2DL1P43626 348 aaPredicted RBP10.81□□□□□ -0.68
UBR1-207ENST00000568782 TBX4P57082 545 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 RING1Q06587 406 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 SPEM2Q0P670 501 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 SRSF5Q13243 272 aaKnown RBP10.81□□□□□ -0.68
UBR1-207ENST00000568782 STX1AQ16623 288 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 EFHC1Q5JVL4 640 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 CCDC183Q5T5S1 534 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 EMC10Q5UCC4 262 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 GJB7Q6PEY0 223 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 ANKS1BQ7Z6G8 1248 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 IRF2BP1Q8IU81 584 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 FAM160A2Q8N612 972 aaPredicted RBP10.81□□□□□ -0.68
UBR1-207ENST00000568782 HMGB4Q8WW32 186 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 SHC3Q92529 594 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 EZH1Q92800 747 aaPredicted RBP10.81□□□□□ -0.68
UBR1-207ENST00000568782 RNF34Q969K3 372 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 PCMTD1Q96MG8 357 aaPredicted RBP10.81□□□□□ -0.68
UBR1-207ENST00000568782 IRX2Q9BZI1 471 aaPredicted RBP10.81□□□□□ -0.68
UBR1-207ENST00000568782 TPSD1Q9BZJ3 242 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 POPDC2Q9HBU9 364 aa10.81□□□□□ -0.68
UBR1-207ENST00000568782 SAMSN1Q9NSI8 373 aaKnown RBP10.81□□□□□ -0.68
UBR1-207ENST00000568782 CDV3Q9UKY7 258 aaKnown RBP10.81□□□□□ -0.68
UBR1-207ENST00000568782 NUP205Q92621 2012 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 TCRBV21S2A2A0A5A6 115 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 SGK1O00141 431 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 GFRA2O00451 464 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 SYNCRIPO60506 623 aaKnown RBP10.8□□□□□ -0.68
UBR1-207ENST00000568782 GREM1O60565 184 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 SLC2A3P11169 496 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 YWHAZP63104 245 aaKnown RBP10.8□□□□□ -0.68
UBR1-207ENST00000568782 CDK17Q00537 523 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 MTA1Q13330 715 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 NNTQ13423 1086 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 PUM1Q14671 1186 aaKnown RBP eCLIP10.8□□□□□ -0.68
UBR1-207ENST00000568782 EIF4HQ15056 248 aaKnown RBP10.8□□□□□ -0.68
UBR1-207ENST00000568782 MSANTD2Q6P1R3 559 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 DENND1BQ6P3S1 775 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 TOGARAM2Q6ZUX3 1019 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 BEND5Q7L4P6 421 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 PHTF2Q8N3S3 785 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 AZIN2Q96A70 460 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 ZC3H10Q96K80 434 aaKnown RBP10.8□□□□□ -0.68
UBR1-207ENST00000568782 PPP1R13BQ96KQ4 1090 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 CIPCQ9C0C6 399 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 LHX5Q9H2C1 402 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 SEMA4GQ9NTN9 838 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 PCDHGC3Q9UN70 934 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 PLA2G4CQ9UP65 541 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 TLR6Q9Y2C9 796 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 SLC27A6Q9Y2P4 619 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 PCDHGA5Q9Y5G8 931 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 SDK1Q7Z5N4 2213 aa10.8□□□□□ -0.68
UBR1-207ENST00000568782 E5RJQ4 531 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 FOXN3O00409 490 aaPredicted RBP10.79□□□□□ -0.68
UBR1-207ENST00000568782 MSI1O43347 362 aaKnown RBP10.79□□□□□ -0.68
UBR1-207ENST00000568782 TSPAN3O60637 253 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 ZNF217O75362 1048 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 PENKP01210 267 aaPredicted RBP10.79□□□□□ -0.68
UBR1-207ENST00000568782 CALCAP01258 141 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 ATP5BP06576 529 aaKnown RBP10.79□□□□□ -0.68
UBR1-207ENST00000568782 GLI1P08151 1106 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 DPP6P42658 865 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 FOXK2Q01167 660 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 CREB5Q02930 508 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 PDCLQ13371 301 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 DRAP1Q14919 205 aaPredicted RBP10.79□□□□□ -0.68
UBR1-207ENST00000568782 CSRP2Q16527 193 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 AASDHQ4L235 1098 aaPredicted RBP10.79□□□□□ -0.68
UBR1-207ENST00000568782 FYB2Q5VWT5 728 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 OR6B2Q6IFH4 312 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 TMEM92Q6UXU6 159 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 SLC36A4Q6YBV0 504 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 LPCAT2Q7L5N7 544 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 TMEM110Q86TL2 294 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 KBTBD6Q86V97 674 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 RASSF3Q86WH2 238 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 ZDHHC17Q8IUH5 632 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 ATP6V0D2Q8N8Y2 350 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 TMEM35BQ8NCS4 154 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 MDGA1Q8NFP4 955 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 GPT2Q8TD30 523 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 WFIKKN2Q8TEU8 576 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 CLEC4CQ8WTT0 213 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 SPAG5Q96R06 1193 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 ZSWIM1Q9BR11 485 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 LSM14BQ9BX40 385 aaKnown RBP10.79□□□□□ -0.68
UBR1-207ENST00000568782 SLC4A5Q9BY07 1137 aa10.79□□□□□ -0.68
UBR1-207ENST00000568782 VPS16Q9H269 839 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms